DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and psmb10

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001002543.2 Gene:psmb10 / 436816 ZFINID:ZDB-GENE-040718-278 Length:276 Species:Danio rerio


Alignment Length:217 Identity:42/217 - (19%)
Similarity:84/217 - (38%) Gaps:16/217 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPE-TVTHLFRITKDIGCAMTG 82
            |..|.:..|:.....:...|...|...|..::....:.|:..:|.: ....:..|..:|.|...|
Zfish    25 EANLSEKGYSAPNARKTGTTIAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCGAG 89

  Fly    83 RIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEI 147
            ..||:....|.............|....|.::.|::..:...|..:     :|.|:::...|.. 
Zfish    90 VAADAEVTTQMMSSNVELHSLSTGRPPLVAMVTRQLKQMLFRYQGH-----IGSSLIVGGVDVN- 148

  Fly   148 GPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNG 212
            |..:|...|.|.:......::|:....|.|..|.:||||:..|:|.||....:::         |
Zfish   149 GAQLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDAITA---------G 204

  Fly   213 IEIGVVSKSDPTFRILDEREIE 234
            |...:.|.|:....::.:::::
Zfish   205 IFCDLGSGSNVDLCVITDKKVD 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 42/217 (19%)
proteasome_alpha_type_6 8..218 CDD:239723 40/199 (20%)
psmb10NP_001002543.2 PRE1 40..224 CDD:223711 39/198 (20%)
proteasome_beta_type_7 43..231 CDD:239732 39/199 (20%)
Pr_beta_C 237..270 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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