DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha1 and Prosalpha3T

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster


Alignment Length:234 Identity:80/234 - (34%)
Similarity:122/234 - (52%) Gaps:12/234 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            ||...|||||||||||||||.:|.:|.. |.|.|.:.:..::||::.|.:.......|..:..:.
  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSG-TCVGLLAKNGVLLATERSVDKLMDTSIPVPRISWLN 68

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM 138
            ::|.|..||..||....|.:.|..|..:::.:|..:|.:.|...:.||.|.|||....||.|.|.
  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133

  Fly   139 VLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKK------YKPNLSEEKAIQLAI 197
            :.:.:|...|..:|::||:|.:||:||..:|.|:..|...|:|:      ..|::.|.|  .:||
  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAK--DVAI 196

  Fly   198 SCLSSVLAID-FKPNGIEIGVVSKSDPT--FRILDEREI 233
            ..:...|..| ..|..:||..|.:...|  |.||::.||
  Fly   197 KVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 73/215 (34%)
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 73/215 (34%)

Return to query results.
Submit another query.