DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and Prosbeta2R2

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_649515.3 Gene:Prosbeta2R2 / 40621 FlyBaseID:FBgn0037296 Length:322 Species:Drosophila melanogaster


Alignment Length:181 Identity:41/181 - (22%)
Similarity:72/181 - (39%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTVALKSGDCAVVATQKKVTEKNIV-PETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANF 101
            |.|.:......::..:.:.|...|| .:|...:..:..:|..|..|...|:::.|:..|.:....
  Fly    51 TVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAGAGTARDTKALVELTRAQLELH 115

  Fly   102 RYKYGYEMPVDVLCRRIADINQVYTQ-----NAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFS 161
            |...|:. .|.|.|     .||:..|     |..   :...|::...|| .|..::.|...|...
  Fly   116 RMNTGFR-KVPVCC-----ANQMIRQLLFRFNGN---IDADMIIGGADN-TGAHLFCTRSDGSTD 170

  Fly   162 GFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNG 212
            .....|:|:....:.|.||.::..:||||.|..||...:::.:..|....|
  Fly   171 TAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 41/181 (23%)
proteasome_alpha_type_6 8..218 CDD:239723 41/181 (23%)
Prosbeta2R2NP_649515.3 PRE1 9..228 CDD:223711 41/181 (23%)
proteasome_beta_type_7 50..239 CDD:239732 41/181 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441046
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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