DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and Psmb2

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:224 Identity:59/224 - (26%)
Similarity:96/224 - (42%) Gaps:55/224 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VALKSGDCAVVATQKKVTEKNIVPETVTH--LFRITKDIGCAMTGRIADSRSQVQKARYEAAN-- 100
            :.::..|..:||:. :|...|||.....|  :|::::.|.....|...|:   ||.|.|...|  
Mouse     5 IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDT---VQFAEYIQKNVQ 65

  Fly   101 -FRYKYGYEM----PVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYF 160
             ::.:.|||:    ..:...|.:||..:..|      |...:::|..||...||::|..|   |.
Mouse    66 LYKMRNGYELSPTAAANFTRRNLADCLRSRT------PYHVNLLLAGYDEHEGPALYYMD---YL 121

  Fly   161 SG-----FKACSVGA-KTLEANSYLEKKYKPNLSEEKAIQLAISCLSS-----VLAIDFKPNGIE 214
            :.     |.|...|| .||   |.|::.|.|.:|.|:|::|...||..     :|.:        
Mouse   122 AALAKAPFAAHGYGAFLTL---SILDRYYTPTISRERAVELLRKCLEELQKRFILNL-------- 175

  Fly   215 IGVVSKSDPTF--RILDEREIEEHLTKIA 241
                    |||  |::|:..| .:|..||
Mouse   176 --------PTFSVRVIDKDGI-HNLENIA 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 59/224 (26%)
proteasome_alpha_type_6 8..218 CDD:239723 50/197 (25%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 56/219 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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