DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and Psma1

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:246 Identity:70/246 - (28%)
Similarity:123/246 - (50%) Gaps:23/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTH---LF 70
            :|..:|::||:||::|:|||.:|:.|.: .||.|||...||:...|:...     |...|   :.
Mouse     6 YDNDVTVWSPQGRIHQIEYAMEAVKQGS-ATVGLKSKTHAVLVALKRAQS-----ELAAHQKKIL 64

  Fly    71 RITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLG 135
            .:...||.::.|..||:|......|.|..:.|:.:...:||..|...|....|:.||....||.|
Mouse    65 HVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYG 129

  Fly   136 CSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSE------EKAIQ 194
            ..:::..|| ::||.:::|.|:..:...:|.|:||::..|.:|||:    ::||      ::.::
Mouse   130 VGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLER----HMSEFMECNLDELVK 189

  Fly   195 LAISCLSSVLAI--DFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEK 243
            ..:..|...|..  |.....:.||:|.| |..|.|.|:.::...|..:.|:
Mouse   190 HGLRALRETLPAEQDLTTKNVSIGIVGK-DLEFTIYDDDDVSPFLDGLEER 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 62/219 (28%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 62/220 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 2/8 (25%)

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