DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and pas-7

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:174 Identity:46/174 - (26%)
Similarity:84/174 - (48%) Gaps:2/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRI 72
            |:|...:.|||:||::|||||.||:.... |.:|::..:..||...|.::.|.........:|.:
 Worm     7 GYDLAASTFSPDGRIFQVEYAQKAVDNAG-TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNV 70

  Fly    73 TKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCS 137
            ..::|.|:.|...|..:....|..||..:...|...||:..:...:|:...::|.... ||.|..
 Worm    71 NDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAG 134

  Fly   138 MVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEK 181
            ...::::.:.|..::..:|:|....:||.:||.....|.:.:||
 Worm   135 AFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 46/174 (26%)
proteasome_alpha_type_6 8..218 CDD:239723 46/174 (26%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 46/174 (26%)
PRE1 6..231 CDD:223711 46/174 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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