DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and pas-3

DIOPT Version :9

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001379751.1 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans


Alignment Length:238 Identity:86/238 - (36%)
Similarity:137/238 - (57%) Gaps:6/238 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTH-LFRI 72
            :|...|||||||||||||||.:||:... |.:.:.|.:..|||.::|...|.:....:|. ::|:
 Worm     5 YDSRTTIFSPEGRLYQVEYAMEAISHAG-TCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRL 68

  Fly    73 TKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCS 137
            :.:|.|.:.|..||:...:...|:.||::|..||.||||:.|.:.:.:..|.|||....||.|.|
 Worm    69 SDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVS 133

  Fly   138 MVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK-PNLSEEKAIQLAISCLS 201
            ::.|.:|...|..:|::||:|.::|:||..:|:....|.:.|:::|| |||.|.|  ||||..|.
 Worm   134 LLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAK--QLAIKVLW 196

  Fly   202 SVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
            ..|.:......:|:.|:::.|.. .:|:|...:|....|||.:
 Worm   197 KTLDVKLASEKVEMAVLTRRDGK-TVLEELTTKEVDALIAEHE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 PRE1 7..243 CDD:223711 85/235 (36%)
proteasome_alpha_type_6 8..218 CDD:239723 78/210 (37%)
pas-3NP_001379751.1 proteasome_alpha_type_4 3..213 CDD:239721 78/210 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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