DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha1 and Prosalpha4

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_315431.3 Gene:Prosalpha4 / 1276122 VectorBaseID:AGAMI1_010744 Length:249 Species:Anopheles gambiae


Alignment Length:249 Identity:80/249 - (32%)
Similarity:133/249 - (53%) Gaps:17/249 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLF 70
            |:.:||.||:|||:|.|.|||||.:|: ::..|.:.::..|..|:..:||...|.....||..:.
Mosquito     2 SSRYDRAITVFSPDGHLLQVEYAQEAV-RKGSTAIGVRGKDVVVLGVEKKSVAKLQEERTVRKIC 65

  Fly    71 RITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPV--DVLCRRIADINQVYTQNAEMRP 133
            .:...:..|..|..||:|..:.:|:.:..:  :|...|.||  :.:.|.||::.|.:||:...||
Mosquito    66 LLDHHVVMAFAGLTADARVLINRAQVQCQS--HKLSEEDPVTLEYITRYIAELKQKHTQSNGRRP 128

  Fly   134 LGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNL--SEEKAIQLA 196
            .|.|.::..:|.:..|.:|||:|:|.:..:||.:.|........:||:.|.|..  :||..|.||
Mosquito   129 FGISCLIGGFDYDGVPHLYKTEPSGVYCEWKANATGRSAKTVREFLEEHYSPAAVSTEEGTITLA 193

  Fly   197 ISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI-------AEK 243
            |..|..|:....|  .:|:.|:.:.:| .::||.:.|||::.||       |||
Mosquito   194 IRALLEVVQSGQK--SLEVAVMRRDEP-MKMLDAQTIEEYVKKIELAKEEEAEK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 67/213 (31%)
Prosalpha4XP_315431.3 proteasome_alpha_type_7 5..213 CDD:239724 67/212 (32%)

Return to query results.
Submit another query.