DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1 and psma5

DIOPT Version :10

Sequence 1:NP_524837.2 Gene:Prosalpha1 / 45780 FlyBaseID:FBgn0263121 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001096282.1 Gene:psma5 / 100124849 XenbaseID:XB-GENE-982653 Length:241 Species:Xenopus tropicalis


Alignment Length:237 Identity:68/237 - (28%)
Similarity:130/237 - (54%) Gaps:8/237 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.:..|||||||:|||||.:|| :...|.:.:::.:...:|.:|::|...:.|.::..:..|.
 Frog     8 YDRGVNTFSPEGRLFQVEYAIEAI-KLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEID 71

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQ-----NAEMRP 133
            ..|||||:|.|||:::.:.|||.|..|..:.|...|.|:.:.:.::::...:.:     .|..||
 Frog    72 AHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRP 136

  Fly   134 LGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAIS 198
            .|.:::....| |.||.::..||:|.|....|.::|:.:..|.|.|::.|..:::.::||:.:::
 Frog   137 FGVALLFGGAD-EKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLT 200

  Fly   199 CLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI 240
            .|..|:........||:..: :....|.:..:.|:||.:..|
 Frog   201 ILKQVMEEKLNATNIELATI-EPGKKFHMYCKEELEEVIKDI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1NP_524837.2 proteasome_alpha_type_6 8..218 CDD:239723 63/213 (30%)
psma5NP_001096282.1 proteasome_alpha_type_5 8..220 CDD:239722 63/213 (30%)

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