DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mei-P26 and Trim2

DIOPT Version :10

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:XP_011238598.1 Gene:Trim2 / 80890 MGIID:1933163 Length:774 Species:Mus musculus


Alignment Length:109 Identity:25/109 - (22%)
Similarity:37/109 - (33%) Gaps:41/109 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1375 LPLHHEHP-LTSHDSSAASSSTAPSKTITIRKGPFGF----------GFTLKSVRVYLGEHSEYY 1428
            |.|.|::| :..|..              :.||...|          |.|....::|..      
Mouse    31 LRLLHKYPFILPHQQ--------------VDKGAIKFVLSGANIMCPGLTSPGAKLYPA------ 75

  Fly  1429 TIEHIVTAVVEGSPAFHA------NLQAEDMITHVN-GHPVHNL 1465
            .::.||..:.||..  ||      .:.||| |..|| |..:.|:
Mouse    76 AVDTIVAIMAEGKQ--HALCVGVMKMSAED-IEKVNKGIGIENI 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..232 CDD:473075
RING_Ubox 222..266 CDD:473075
Bbox_SF 261..302 CDD:469587
Bbox2_BRAT-like 318..361 CDD:380856
BBC 369..494 CDD:128778
NHL_brat_like 913..1186 CDD:271329
NHL repeat 936..972 CDD:271329
NHL repeat 983..1025 CDD:271329
NHL repeat 1028..1064 CDD:271329
NHL repeat 1068..1107 CDD:271329
NHL repeat 1112..1151 CDD:271329
NHL repeat 1157..1183 CDD:271329
Trim2XP_011238598.1 RING-HC_TRIM2 41..91 CDD:438423 11/71 (15%)
Bbox2_TRIM2_C-VII 141..182 CDD:380882
BBC 187..313 CDD:128778
IG_FLMN 351..447 CDD:214720
NHL_TRIM2_like 497..774 CDD:271330
NHL repeat 515..554 CDD:271330
NHL repeat 562..601 CDD:271330
NHL repeat 604..641 CDD:271330
NHL repeat 648..693 CDD:271330
NHL repeat 699..741 CDD:271330
NHL repeat 744..770 CDD:271330
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.