DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and ftr06

DIOPT Version :9

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:XP_021324313.1 Gene:ftr06 / 797387 ZFINID:ZDB-GENE-070912-228 Length:1498 Species:Danio rerio


Alignment Length:655 Identity:117/655 - (17%)
Similarity:207/655 - (31%) Gaps:239/655 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 DHHYE-------TATVAEQAVRADLEET-LSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQI 411
            ||:.:       ...||....|..|||: :.:...:.:.|     :|...|..:|:..|:..|| 
Zfish     3 DHYRDRDLCCCFLGPVASTGDRRALEESRVGEKTLQEEVC-----SLRKELLAMQTSLDSFMQQ- 61

  Fly   412 EDAYKCYKRMLESIKDQMLNELGRLHSDRELKIMDLMQSMENTMGKLQHAAQFGQRAV------- 469
                   :..|::..|:.::..|             .|...||...:..:....|.|:       
Zfish    62 -------RISLDTKVDEKVHVSG-------------SQVCSNTSSHVDSSESISQPALSNLACGR 106

  Fly   470 ---------------DKANSI-------EFLLLKPIISAQCLNLME-----------QTPKCDIN 501
                           |:::.:       :||.|:|:.:::.|..|.           :|.:..||
Zfish   107 IPPIKMVFPTFGGVNDESDPVIYLERCNDFLALRPMSNSEILATMRSVLHASARDWWETVRFKIN 171

  Fly   502 -----------------YQLQFDSK--------PEMFEQFA---REMFGKFQTDHIDSSPKKLGM 538
                             ||...:.|        .|....||   :.:|.:::.:..|:...|..:
Zfish   172 SWEGFQKAFLAVFLPEDYQDVLEEKVRNRLQGTNESVRDFAFSFQALFKRWKKEATDTEVLKALL 236

  Fly   539 -------TQQLQQQQQQQQQL----QQQQHQHQHQVQQQQHHHQQQQQQKQQV--QHQQQQQK-L 589
                   ..||:.:.|..::|    .|.:..:.||::     :.|.|..|...  ||..::.| :
Zfish   237 KAMNPCYASQLRGRAQTVEELVRLGTQLERDYDHQIK-----YNQLQLPKSSFLDQHLSKKSKGV 296

  Fly   590 QLQQQQQHQHNSNNLIVG--HRGSSSVQGRLTSAVFSPISLPSSLQSSFDGDTNSVMSNFSMMDS 652
            :::.....:.:..:|:..  |...|                |.|            .|.|..:.|
Zfish   297 EVKSNLPPEQSLTSLLCWRCHENHS----------------PGS------------CSKFKAVLS 333

  Fly   653 PPQPSSQQQLPSAQQQSQQQQQQQQQQQAVVLQQVQQQQKHQQHQVQQQQQQQVLHQPTSAQSMP 717
            ..|...|.|   ..::.|.|.||:....|...|:..::......::.::...::|.         
Zfish   334 GKQTGGQFQ---GTKEFQPQNQQRGMLSAYDTQRFVKKDVSSGRKLDKRDGIKILR--------- 386

  Fly   718 QQLGQLVAPQGIVQQAGHVNLNAGPGPNISINGLGAGGPPPSFSMLEYNISRLASLTETMPDTLN 782
                |||.|..:...:|...::.|                .::::|  |:.....:.|.     |
Zfish   387 ----QLVIPMMVRNCSGKALVDTG----------------ATYTLL--NVDLWNKIKEP-----N 424

  Fly   783 DALAVGGGAAGP--VPNVVAQVPGGSAVTGAAVVGASHAHQQQSQAVMPASAVTPTQPITLADIL 845
            :.|.|  ...||  :.|..|.||.|..|....:   ...|.|....|:||      |.:..:.:|
Zfish   425 ERLDV--WHEGPLYLANGDATVPLGQKVLDFYL---QDLHFQVPTVVLPA------QNLVYSMVL 478

  Fly   846 SGDQRALNNLQALAKLGLNNND---------------------------FCMPPAT---SPSLQS 880
            ..|..||..||      ||..|                           .|.||..   |.||.|
Zfish   479 GLDFIALTGLQ------LNIKDQLYSFSDDPQGRVFPFQPPITPGDSWKCCKPPGNYNPSASLYS 537

  Fly   881 LNPIV 885
            ..|.|
Zfish   538 AIPPV 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..230 CDD:354325
BBOX 321..360 CDD:237988 2/11 (18%)
BBC 369..494 CDD:128778 26/165 (16%)
NHL_brat_like 913..1186 CDD:271329
NHL repeat 936..972 CDD:271329
NHL repeat 983..1025 CDD:271329
NHL repeat 1028..1064 CDD:271329
NHL repeat 1068..1107 CDD:271329
NHL repeat 1112..1151 CDD:271329
NHL repeat 1157..1183 CDD:271329
ftr06XP_021324313.1 Retrotrans_gag 159..>218 CDD:309014 9/58 (16%)
retropepsin_like 400..484 CDD:133136 23/117 (20%)
RT_LTR 644..820 CDD:238825
RNase_HI_RT_Ty3 914..1035 CDD:260006
rve 1215..1309 CDD:307008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR25462
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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