DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and rnf207b

DIOPT Version :9

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:NP_001188378.1 Gene:rnf207b / 568322 ZFINID:ZDB-GENE-080227-9 Length:634 Species:Danio rerio


Alignment Length:614 Identity:124/614 - (20%)
Similarity:212/614 - (34%) Gaps:148/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LDSLED----SCSGLMIKDGDKLCKLCSLRLVMPRILSCLHVFCEDCLQAVVSKDTMSASSPNSC 202
            :|:|.|    :|..|       :|.||..:...|.:|.|.|.||..||:..|:            
Zfish     9 VDNLYDLDSANCHPL-------VCHLCQEQYEHPCLLDCYHTFCASCLRGRVA------------ 54

  Fly   203 SSSSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKALPC-DYIVTNILDLSNLESEHIVCTSC- 265
                      .:||:     ||||..::.:  |||.|||. |.::..::|.|....|.:.|.:| 
Zfish    55 ----------DSRLT-----CPVCGHQSVV--KGINALPPEDRLLKFLVDSSADSEETVQCANCD 102

  Fly   266 ----KSKEEAISRCNDCANFLCNGC-DNAHKYMRCFENHHVVRIEDLTKNVHDKLIIHKPVFCPQ 325
                |...:|:..||.|...||..| :..|| .:.|..|.:|.:...||..|.|..:|:. |...
Zfish   103 LECKKQDVDAMYYCNTCCQPLCRDCRETTHK-AKMFSRHEIVSLAKRTKEAHKKCALHEE-FYIM 165

  Fly   326 HVSENLKYYCFTC----QVPTCNDCLLSDHKGSDHHYETATV-----AEQAVRADLEETLSDTLK 381
            ..:|.....|..|    ||.:...|:         ..|||.:     .:|||.|..|..:|    
Zfish   166 FSTEKKSMLCINCFRDMQVESRAHCI---------DIETAYIQGCEKLDQAVLAVKELQMS---- 217

  Fly   382 KADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQMLNELGRLHSDRELKIMD 446
                ..:|...|.:.:.|:::..|.....|...:...:..|...|..:|......|.::|....:
Zfish   218 ----AREAIILLKAMIGEVRANVDEEESAICTLFSNMQEKLAERKKILLKAARSQHEEKERTFKE 278

  Fly   447 LMQSMENTMGKLQHAAQFGQRAVDKANSIEFLLLKPIISAQCLNLMEQTPKCDINYQLQFDSKPE 511
            .:..:...:..||.........:..||..|||                    |:.|||.      
Zfish   279 QLSHLAALLPTLQVHLVTCSAFLSSANKFEFL--------------------DMGYQLM------ 317

  Fly   512 MFEQFAREMFGKFQTDHIDSSPKKLGMTQQLQQQQQQQQQL-----------QQQQHQHQHQVQQ 565
                   |...|     |...|.:|..||..:...:.:.:.           |::.......|..
Zfish   318 -------ERLKK-----IVKLPHRLRPTQSSKINTEYRSEFARCLEPLLLLGQRRSMSTTGSVAL 370

  Fly   566 QQHHHQQQQQQKQQVQ-HQQQQQKLQL-----QQQQQHQHNSNNLIVGHRGSSSVQGRLTSAVFS 624
            ...:.....|....|| |......:.|     ::...|::.|..:::...|.:.......:...|
Zfish   371 ALGNASGLMQSSLSVQCHSPAMSDMSLCSSVVRRPTSHRYISTKVLLAKGGETPFMEHCCNYENS 435

  Fly   625 PISLPSSLQSSFDGDTNSVMSNFSMMDSPPQPSSQQQL--PSAQQQSQ---------------QQ 672
            ..:|.:.:|...| ....:..:.:...|..:|.|..::  .|.|..||               ::
Zfish   436 YRTLQTEIQKLKD-QVQEIHRDLTKHHSLTKPDSMSEILEKSVQVDSQISSEYASVELMRAMFEE 499

  Fly   673 QQQQQQQQAVVLQQVQQQQKHQQHQVQQQ 701
            ..::..|:....|::.:.|.|...|::|:
Zfish   500 IWEETLQRVANEQEIYEAQLHDLLQLKQE 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..230 CDD:354325 18/71 (25%)
BBOX 321..360 CDD:237988 7/42 (17%)
BBC 369..494 CDD:128778 20/124 (16%)
NHL_brat_like 913..1186 CDD:271329
NHL repeat 936..972 CDD:271329
NHL repeat 983..1025 CDD:271329
NHL repeat 1028..1064 CDD:271329
NHL repeat 1068..1107 CDD:271329
NHL repeat 1112..1151 CDD:271329
NHL repeat 1157..1183 CDD:271329
rnf207bNP_001188378.1 RING 25..63 CDD:214546 16/64 (25%)
zf-B_box 98..145 CDD:279037 15/47 (32%)
iSH2_PI3K_IA_R 202..310 CDD:304922 21/115 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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