DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and tn

DIOPT Version :10

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster


Alignment Length:1606 Identity:273/1606 - (16%)
Similarity:470/1606 - (29%) Gaps:683/1606 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 CKLCSLRLVMPRILSCLHVFC-EDCLQAVVSKDTMSASSPNSCSSSSFDGSEHQNRLSAVFIECP 224
            |.:|..|..:|::|.|.|.|| |.|::.:|                  |....|       ::||
  Fly    10 CCVCLDRYRIPKLLPCQHSFCMEPCMEGLV------------------DYVRRQ-------VKCP 49

  Fly   225 VCKQETPLGPKGIKALPCDYIVTNILDLSNLE---------SEHIV--CTSCKSKEEAISRCNDC 278
            .|:.|..:...|::|.|.:..:...|:| ::|         |..|:  |..| |::..:|.|..|
  Fly    50 ECRAEHRIPYNGVQAFPTNVTLQRFLEL-HIEITGELPDPTSGQIMERCGVC-SEKAYLSHCAHC 112

  Fly   279 ANFLCNGCDNAHKYMRCFENHHVVRIE------DLTKNVH---DKL-IIHKPVFCPQ----HVSE 329
            ...:|..|.:||.        .::|.|      .:.:::|   |.| ||.|.....|    .|:|
  Fly   113 EKKICEDCKSAHM--------DILRREITRFNSQIRRSLHRLQDSLAIIEKNTMSLQTNAISVTE 169

  Fly   330 NLKYYCFTCQVPTCNDCLLSDHKGSDHHYETATVA----EQAVRADLEETLSDTLKKADYCNDAG 390
            .:                       |..|:..|.|    ...::.:::..|:..|:......:  
  Fly   170 EI-----------------------DEIYQRITKAIKDRSDQLKGEIDRYLAVELRNLTTLKE-- 209

  Fly   391 SNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQMLNELGRL------HSDRELKIMDLMQ 449
             ||...:|.:.|..|||.:.:.:..:.....|...|:..|..:..|      ::|...::..|:.
  Fly   210 -NLDLEITNITSNCDTVDKYMNETVEWDDCELMDTKEIFLKTVEFLRHFEYENNDYSRRVRFLVS 273

  Fly   450 SMENTMGKLQHAAQFGQ-----RAVDKANSIEFLLLKPIISAQ------------CLNLMEQTPK 497
            ...|.:  :.:.|.||.     .:.....|:....|.|..:.|            .....:|..:
  Fly   274 IDPNQL--VMNLATFGDLNIAPHSTPSGGSVSSSHLAPPSALQPGLMRSKSDHRLATQFRQQEER 336

  Fly   498 CDINYQ-----LQFDSKPE-MFEQFAREMFGK------FQTDH-IDSSPKKLGMTQQL------- 542
            ...|.:     .:|..:|: ...|...:.:|:      ::.|: .:.|..:.|.:.:.       
  Fly   337 SGYNDEPVLGGRKFGERPQRSATQANNDRYGRSGGDYDYENDYDNEGSSGRAGKSSRFRSRFVRS 401

  Fly   543 ---------QQQQQQQQQLQQQQHQ--------------------HQHQVQQQQHHHQQQQQQKQ 578
                     |||||:||:|::::.:                    ....||:.....::::::|.
  Fly   402 HQNDDSDSEQQQQQRQQELKERKDRVLDSEDVSRGQLSGIIRLSDCSRVVQRLADIGKEKKEKKS 466

  Fly   579 Q--------VQHQQQQQKLQLQ-QQQQHQHNS---NNLIVGHR---GSSSVQGRLTSAVFSPISL 628
            .        ||...|.||..:| |||::|.|:   ..|....|   ||||..|..||.       
  Fly   467 DAAAAAQAAVQAAIQAQKAAMQRQQQKNQQNAADEEELARQKRKNAGSSSTGGAATST------- 524

  Fly   629 PSSLQSSFDGDT-----------------------------NSVMSNFSMMDSPPQPSSQQQ-LP 663
                 ||..|||                             ||..|......|..:.::::: :.
  Fly   525 -----SSGGGDTASDQRVAALKNRGGEESDGSSNQAASPVRNSAASTTRAEVSVNEANTEEEGVA 584

  Fly   664 SAQQQSQQQQQQQQQQQAVVLQQVQQQQKHQQHQVQQQQ-QQQVLH------QPTSA-------- 713
            |....|::.::.:.:.:.   ::|.::::..:..|:::: .:::|:      ||||:        
  Fly   585 SESSDSEEDEEVEDEDEE---EEVDEEEEQVEESVEEEEAPRELLNLPEEALQPTSSEVTEEEES 646

  Fly   714 ----------------------------------------------------------------- 713
                                                                             
  Fly   647 SSEYEEVTATESEEEQEEVEGRVIEIESQDLPVINVLPPENDIAHKVEESPVDHISNQELMEETD 711

  Fly   714 --------------------QSMPQQLGQLVAPQGIVQQAGHVNLN------------------- 739
                                :|.|....|:.|.:. .|::|..:.:                   
  Fly   712 KSTDESPEEEEEEEYTEEEIESKPPVSAQVAAVKK-TQRSGSSDSSASTESSASSAAAAAVAATS 775

  Fly   740 -----AGPGPNISINGLGAGGPPPSFSMLEYNISR--------------------LASLT----- 774
                 |.|..: |.|........||.|  .|:.:|                    .||.|     
  Fly   776 TSATAAAPATS-SSNSTSQNAKAPSSS--RYSTARDTTAVPEKKPFVSRFLPQHSTASTTNGSAD 837

  Fly   775 --------------------ETMPDT--------------------------------------- 780
                                |:.|:|                                       
  Fly   838 KKKAESSSSSEEETSSESESESEPETKAKSSATSSTTNTKSTPNSAASSTTAASSSTTSGSYRDR 902

  Fly   781 -------LNDALAVGGGAAGPVPNVVAQVPGGSAVTGA---AVVGASHAHQQQ------------ 823
                   .:|:.:...|.:.......:....||..||.   ||....|..:.:            
  Fly   903 LEARRASRDDSSSTAAGRSSYATPSSSGYGSGSGTTGGRTRAVPAPHHTSESEDRYGSGTGSSYT 967

  Fly   824 ---------SQAVMPASAVTPTQPITLADILSGD-------------------QRALNNLQALAK 860
                     |..|...|..|||.........:||                   :..|...::..:
  Fly   968 SRFLNKSKSSAIVTQPSLSTPTASFDEDATGTGDDSDSRYGTGRSRYLAMKERRTRLARSRSSHQ 1032

  Fly   861 LGLNNNDFCMP--PAT-SPS--------------------------------------------- 877
            .|.::.|...|  |.| |||                                             
  Fly  1033 FGNDDEDLDEPVSPTTVSPSAYLASRCAYSGYGSSDLSRSRSSHALKSRDNSPITDRGAGSSRSS 1097

  Fly   878 ----------------------------------------------------------------- 877
                                                                             
  Fly  1098 GLGGSSTTDSKDGEALSSWARYLKNKYGNKSSKDSAGSSGSARDTHAGSSTSSSAAASSSHAHGY 1162

  Fly   878 -------------------------LQSLNPIVGGVEDMGLNNF---------HAVAAPGTTSVV 908
                                     |:..|.:....:|...|..         .||||.|    :
  Fly  1163 GSGTSGSSGRSTASDVSRRLSLGLPLRQANELASSDDDGSKNGLGSPTSPTVAAAVAAAG----I 1223

  Fly   909 TGRNKATPMQIRCK-------FGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGAL 966
            ||.....|.|:..:       .|..|:..|.|..|.|..:|.|..|:|||::|||::|||..|..
  Fly  1224 TGAAGTIPKQVYLRKRQQLFQLGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIF 1288

  Fly   967 KFQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRKI-----AIRYID 1026
            ..:||..|..||:......||| :..|::::.||.|.  |:|:....|.|:|..     |....:
  Fly  1289 VKEFGEYGNGEGEFDCLAGVAV-NRIGQYIIADRYNH--RIQVLDPQGRFLRAFGSQGTADGKFN 1350

  Fly  1027 IVAGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWF-DC---SDYMREPSDIAIRD-NDFYVCDF 1086
            ...|:...|.|.|...|..:..|.|...:|..|..| .|   ...:..|..||:.: |...|.|.
  Fly  1351 YPWGVTTDALGFIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDS 1415

  Fly  1087 KGHCVAVFQDDGTFLYRIGNE-------KVTCFPNGIDISNAGDVLIGDSHGNRFHV-------- 1136
            ..|.:.:|..:|..|..:|.|       |   ||.|:.:.:.|.:.:.||..||..:        
  Fly  1416 NNHRIQIFDVNGKVLSTVGGEGSDDGQFK---FPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFL 1477

  Fly  1137 ACYSREGALQSEFECPHVKVSRCCGLKITSEGYVVTLAKNNHHVLV 1182
            ..:...|:..|||:...       |:.|.|.|.::...:.||.|.|
  Fly  1478 KTFGSWGSGDSEFKGLE-------GVAIMSNGNILVCDRENHRVQV 1516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..232 CDD:473075 18/71 (25%)
RING_Ubox 222..266 CDD:473075 13/54 (24%)
Bbox_SF 261..302 CDD:469587 10/42 (24%)
Bbox2_BRAT-like 318..361 CDD:380856 6/46 (13%)
BBC 369..494 CDD:128778 23/147 (16%)
NHL_brat_like 913..1186 CDD:271329 83/302 (27%)
NHL repeat 936..972 CDD:271329 16/35 (46%)
NHL repeat 983..1025 CDD:271329 13/46 (28%)
NHL repeat 1028..1064 CDD:271329 10/36 (28%)
NHL repeat 1068..1107 CDD:271329 11/39 (28%)
NHL repeat 1112..1151 CDD:271329 12/46 (26%)
NHL repeat 1157..1183 CDD:271329 8/26 (31%)
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187 17/69 (25%)
CC_brat-like 124..232 CDD:475168 25/141 (18%)
NHL_TRIM71_like 1234..1517 CDD:271324 81/296 (27%)
NHL repeat 1258..1297 CDD:271324 17/38 (45%)
WD40 repeat 1261..1304 CDD:293791 18/42 (43%)
NHL repeat 1305..1344 CDD:271324 12/41 (29%)
WD40 repeat 1345..1377 CDD:293791 8/31 (26%)
NHL repeat 1352..1388 CDD:271324 10/35 (29%)
NHL repeat 1396..1436 CDD:271324 11/39 (28%)
WD40 repeat 1402..1439 CDD:293791 11/36 (31%)
NHL repeat 1445..1475 CDD:271324 8/29 (28%)
WD40 repeat 1446..1485 CDD:293791 7/38 (18%)
NHL repeat 1491..1517 CDD:271324 8/33 (24%)

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