DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and brat

DIOPT Version :9

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:NP_001188842.2 Gene:brat / 35197 FlyBaseID:FBgn0010300 Length:1061 Species:Drosophila melanogaster


Alignment Length:1291 Identity:275/1291 - (21%)
Similarity:458/1291 - (35%) Gaps:432/1291 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SDDASNSSVLED----------------------IDVSNTSSSSSSSSSSSSSSGSCSGSGTDTD 71
            |..||:|::..|                      |..|.:||||:||||.||||.|.|.|.:.:.
  Fly    39 SPPASDSAICSDEYTGGSSVKSRSEVTVINGHHPISASVSSSSSASSSSCSSSSSSSSSSSSSSS 103

  Fly    72 TGKGSSNVGSLDVTSSSSIGSETSISSTGSTAIAGPSTLLDDSNSSGLGLVVDVDSNGSSQELSS 136
            :..|.|..||    :|||:.|..:::|:....:.|.:  |..||:.|                 :
  Fly   104 STSGLSGCGS----TSSSVISANNVASSNGPGVIGSN--LQSSNNGG-----------------N 145

  Fly   137 HGVTELDSLEDSCSGLMIKDGDKLCKLCSLRLVMPRILSCLHVFCEDCLQAVVSKDTMSASSPNS 201
            .|::.|                                             ||.....|.||.||
  Fly   146 SGISSL---------------------------------------------VVGAGKGSNSSSNS 165

  Fly   202 CSS-SSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKALPCDYIVTNILDLSNLESEHIVCTSC 265
            .|| :|.:||.                      |:                          ||:|
  Fly   166 SSSNTSANGSP----------------------PR--------------------------CTAC 182

  Fly   266 KSK-EEAISRCNDCANFLCNGCDNAHKYMRCFENHHVVRIE------------------------ 305
            ||| .:|:::|.:|.::||..|..||::|.||..|:|..|:                        
  Fly   183 KSKCSDAVAKCFECQSYLCANCVTAHEFMHCFNGHNVCLIKGFEASTTGTPLSVGSPSNNPASNE 247

  Fly   306 -----DLTKNVH-------------------------DKLII----------------------- 317
                 .||..:.                         .|:::                       
  Fly   248 FKYASSLTMMLQQQQQLDSQQQQQQQQLLPAQPMSQLSKIVLAAAAQANSQEQQREDSIYGSLHP 312

  Fly   318 ----------HKPVFCPQHVSENLKYYCFTCQVPTCNDCLLSDHKGSDHHYE-------TATVAE 365
                      .:.:|||:|..|.||:.|.||.:..|.:|::.:|....|..|       |.:...
  Fly   313 QQQQQQQQQQQRQLFCPRHKQELLKFSCRTCCILVCKECIVLEHSTGLHELENVQSPGMTTSTGS 377

  Fly   366 QAVRADLEETLSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQML 430
            .|..:.|:..|:|...|.........|....||:::.|:.....::.:.::.:..||:..|.::|
  Fly   378 TANESALQTLLADMRGKIGEIVGIAGNSDQNLTKVKLQYQKAHNELNETHQFFASMLDERKTELL 442

  Fly   431 NELGRLHSDRELKIMDLMQSMENTMGKLQHAAQFGQRAVDKANSI--EFLLLKPIISAQCLNLME 493
            .||..|::.:........|...:.:.|.....:..:|:....:|:  |.|||:..:..|   |..
  Fly   443 KELETLYTAKVNSNNSWQQRSRDLIDKGLATCEAVERSPAPPSSLLTEALLLRKSLEQQ---LQT 504

  Fly   494 QTPKCDINYQLQFDSKPEMFEQFAREMFGKFQTDHIDSSPKKLGMTQQ-------LQQQQQQQQQ 551
            ...:..:.::::|.|..:..:...|..||..:.:..|..|..:.:|..       :.:..|....
  Fly   505 GIQEMQLPFEIEFMSNYQSIQAGVRNTFGYIRANSSDGGPTGMSLTSNGHGKQPPIARPTQSASN 569

  Fly   552 LQQQQHQHQHQVQQQQHHHQQQQQQKQQVQHQQQQQKLQLQQQQQHQHNSNNLIVGHRGSSSVQG 616
            .........|....||.||.......|...|||.|.          |.:.:.|.:|..|:|.:. 
  Fly   570 SSASSAGSGHHGHHQQSHHHGHHNHHQTAHHQQLQA----------QSSLHGLGLGLSGASLLD- 623

  Fly   617 RLTSAVFSPISLPSSLQSSFDGDTNSVMSNFSMMDSPPQPSSQQQLPSAQQQSQQQQQQQQQQQA 681
                            .||..|......||..::                               
  Fly   624 ----------------SSSSAGGAVGAFSNGGLL------------------------------- 641

  Fly   682 VVLQQVQQQQKHQQHQVQQQQQQQVLHQPTSAQSMPQQLGQLVAPQGIVQQAGHVNLNAGPGPNI 746
                                    :..:..:|.::.|..|:|:..:|            |.|.. 
  Fly   642 ------------------------LGGRDRNALAVEQHFGELMPKRG------------GGGYT- 669

  Fly   747 SINGLGAGGPPPSFSMLEYNISRLASLTETMPDTLNDALAVGGGAAGPVPNVVAQVP--GGSAVT 809
                 |:.|...| ::..||  .....:....|.|..::..|...:..|.:..|.:.  |||.|:
  Fly   670 -----GSNGSATS-AVAHYN--PYEKWSNGGSDNLFSSVTSGVSGSSAVADAFASLSAVGGSVVS 726

  Fly   810 GAAVVGASHAHQQQSQAVMPASAVTPTQPITLADILSGDQRALNNLQALAKLGLNNNDFCMPPAT 874
            ||...|::         |...|.:..|..:..|.|                         .||.:
  Fly   727 GAGAGGST---------VSSESLLDLTNKLLSATI-------------------------YPPKS 757

  Fly   875 SPSLQSLNPIVGGVEDMGLNNFHAVAAPGTTSVVTGRNKATPMQIRCKFGSLGTAKGQFNSPHGF 939
                                                :.|...|...||||..|..:|||..|.|.
  Fly   758 ------------------------------------QIKRQKMIYHCKFGEFGVMEGQFTEPSGV 786

  Fly   940 CLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNER 1004
            .:....:|||||||||||::|||.|..|||||..||.:.||.||.:|||:.|:|..:|.:| :..
  Fly   787 AVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER-SPT 850

  Fly  1005 SRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDCSDYMR 1069
            .::||:::.|.|:||.....:....|:.|..||.|:.|:.....|.:..:.|.::..|.||.::.
  Fly   851 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLE 915

  Fly  1070 EPSDIAIRD-NDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVTCFPNGIDISNAGDVLIGDSHGNR 1133
            .|:.:.:.| .:.::.|.:.|||.||..:|.:|.:||.|.:|.:|.|:.|::.|::||.|:| |.
  Fly   916 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNH-NN 979

  Fly  1134 FHVACYSREGALQSEFECPHVKVSRCCGLKITSEGYVVTLAKNNHHVLVLNTLYVH 1189
            |::..::::|.|.|..| ..||.::|..:.:..:|.||..:|:..       ||::
  Fly   980 FNLTIFTQDGQLISALE-SKVKHAQCFDVALMDDGSVVLASKDYR-------LYIY 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..230 CDD:354325 12/72 (17%)
BBOX 321..360 CDD:237988 15/45 (33%)
BBC 369..494 CDD:128778 25/126 (20%)
NHL_brat_like 913..1186 CDD:271329 97/273 (36%)
NHL repeat 936..972 CDD:271329 21/35 (60%)
NHL repeat 983..1025 CDD:271329 14/41 (34%)
NHL repeat 1028..1064 CDD:271329 9/35 (26%)
NHL repeat 1068..1107 CDD:271329 12/39 (31%)
NHL repeat 1112..1151 CDD:271329 13/38 (34%)
NHL repeat 1157..1183 CDD:271329 5/25 (20%)
bratNP_001188842.2 BBOX 176..222 CDD:197662 20/93 (22%)
zf-B_box 328..366 CDD:279037 14/37 (38%)
NHL_brat_like 760..1030 CDD:271329 99/278 (36%)
NHL repeat 783..819 CDD:271329 21/35 (60%)
NHL repeat 830..871 CDD:271329 14/41 (34%)
NHL repeat 874..910 CDD:271329 9/35 (26%)
NHL repeat 914..954 CDD:271329 12/39 (31%)
NHL repeat 959..997 CDD:271329 14/39 (36%)
NHL repeat 1002..1027 CDD:271329 7/31 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447040
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133242at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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