DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and brat

DIOPT Version :10

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:NP_001188842.2 Gene:brat / 35197 FlyBaseID:FBgn0010300 Length:1061 Species:Drosophila melanogaster


Alignment Length:1291 Identity:275/1291 - (21%)
Similarity:458/1291 - (35%) Gaps:432/1291 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SDDASNSSVLED----------------------IDVSNTSSSSSSSSSSSSSSGSCSGSGTDTD 71
            |..||:|::..|                      |..|.:||||:||||.||||.|.|.|.:.:.
  Fly    39 SPPASDSAICSDEYTGGSSVKSRSEVTVINGHHPISASVSSSSSASSSSCSSSSSSSSSSSSSSS 103

  Fly    72 TGKGSSNVGSLDVTSSSSIGSETSISSTGSTAIAGPSTLLDDSNSSGLGLVVDVDSNGSSQELSS 136
            :..|.|..||    :|||:.|..:::|:....:.|.:  |..||:.|                 :
  Fly   104 STSGLSGCGS----TSSSVISANNVASSNGPGVIGSN--LQSSNNGG-----------------N 145

  Fly   137 HGVTELDSLEDSCSGLMIKDGDKLCKLCSLRLVMPRILSCLHVFCEDCLQAVVSKDTMSASSPNS 201
            .|::.|                                             ||.....|.||.||
  Fly   146 SGISSL---------------------------------------------VVGAGKGSNSSSNS 165

  Fly   202 CSS-SSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKALPCDYIVTNILDLSNLESEHIVCTSC 265
            .|| :|.:||.                      |:                          ||:|
  Fly   166 SSSNTSANGSP----------------------PR--------------------------CTAC 182

  Fly   266 KSK-EEAISRCNDCANFLCNGCDNAHKYMRCFENHHVVRIE------------------------ 305
            ||| .:|:::|.:|.::||..|..||::|.||..|:|..|:                        
  Fly   183 KSKCSDAVAKCFECQSYLCANCVTAHEFMHCFNGHNVCLIKGFEASTTGTPLSVGSPSNNPASNE 247

  Fly   306 -----DLTKNVH-------------------------DKLII----------------------- 317
                 .||..:.                         .|:::                       
  Fly   248 FKYASSLTMMLQQQQQLDSQQQQQQQQLLPAQPMSQLSKIVLAAAAQANSQEQQREDSIYGSLHP 312

  Fly   318 ----------HKPVFCPQHVSENLKYYCFTCQVPTCNDCLLSDHKGSDHHYE-------TATVAE 365
                      .:.:|||:|..|.||:.|.||.:..|.:|::.:|....|..|       |.:...
  Fly   313 QQQQQQQQQQQRQLFCPRHKQELLKFSCRTCCILVCKECIVLEHSTGLHELENVQSPGMTTSTGS 377

  Fly   366 QAVRADLEETLSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQML 430
            .|..:.|:..|:|...|.........|....||:::.|:.....::.:.::.:..||:..|.::|
  Fly   378 TANESALQTLLADMRGKIGEIVGIAGNSDQNLTKVKLQYQKAHNELNETHQFFASMLDERKTELL 442

  Fly   431 NELGRLHSDRELKIMDLMQSMENTMGKLQHAAQFGQRAVDKANSI--EFLLLKPIISAQCLNLME 493
            .||..|::.:........|...:.:.|.....:..:|:....:|:  |.|||:..:..|   |..
  Fly   443 KELETLYTAKVNSNNSWQQRSRDLIDKGLATCEAVERSPAPPSSLLTEALLLRKSLEQQ---LQT 504

  Fly   494 QTPKCDINYQLQFDSKPEMFEQFAREMFGKFQTDHIDSSPKKLGMTQQ-------LQQQQQQQQQ 551
            ...:..:.::::|.|..:..:...|..||..:.:..|..|..:.:|..       :.:..|....
  Fly   505 GIQEMQLPFEIEFMSNYQSIQAGVRNTFGYIRANSSDGGPTGMSLTSNGHGKQPPIARPTQSASN 569

  Fly   552 LQQQQHQHQHQVQQQQHHHQQQQQQKQQVQHQQQQQKLQLQQQQQHQHNSNNLIVGHRGSSSVQG 616
            .........|....||.||.......|...|||.|.          |.:.:.|.:|..|:|.:. 
  Fly   570 SSASSAGSGHHGHHQQSHHHGHHNHHQTAHHQQLQA----------QSSLHGLGLGLSGASLLD- 623

  Fly   617 RLTSAVFSPISLPSSLQSSFDGDTNSVMSNFSMMDSPPQPSSQQQLPSAQQQSQQQQQQQQQQQA 681
                            .||..|......||..::                               
  Fly   624 ----------------SSSSAGGAVGAFSNGGLL------------------------------- 641

  Fly   682 VVLQQVQQQQKHQQHQVQQQQQQQVLHQPTSAQSMPQQLGQLVAPQGIVQQAGHVNLNAGPGPNI 746
                                    :..:..:|.::.|..|:|:..:|            |.|.. 
  Fly   642 ------------------------LGGRDRNALAVEQHFGELMPKRG------------GGGYT- 669

  Fly   747 SINGLGAGGPPPSFSMLEYNISRLASLTETMPDTLNDALAVGGGAAGPVPNVVAQVP--GGSAVT 809
                 |:.|...| ::..||  .....:....|.|..::..|...:..|.:..|.:.  |||.|:
  Fly   670 -----GSNGSATS-AVAHYN--PYEKWSNGGSDNLFSSVTSGVSGSSAVADAFASLSAVGGSVVS 726

  Fly   810 GAAVVGASHAHQQQSQAVMPASAVTPTQPITLADILSGDQRALNNLQALAKLGLNNNDFCMPPAT 874
            ||...|::         |...|.:..|..:..|.|                         .||.:
  Fly   727 GAGAGGST---------VSSESLLDLTNKLLSATI-------------------------YPPKS 757

  Fly   875 SPSLQSLNPIVGGVEDMGLNNFHAVAAPGTTSVVTGRNKATPMQIRCKFGSLGTAKGQFNSPHGF 939
                                                :.|...|...||||..|..:|||..|.|.
  Fly   758 ------------------------------------QIKRQKMIYHCKFGEFGVMEGQFTEPSGV 786

  Fly   940 CLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNER 1004
            .:....:|||||||||||::|||.|..|||||..||.:.||.||.:|||:.|:|..:|.:| :..
  Fly   787 AVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER-SPT 850

  Fly  1005 SRMQIFSKCGHFMRKIAIRYIDIVAGLAVTAKGHIVAVDSVSPTVFVISEEGELVRWFDCSDYMR 1069
            .::||:::.|.|:||.....:....|:.|..||.|:.|:.....|.:..:.|.::..|.||.::.
  Fly   851 HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLE 915

  Fly  1070 EPSDIAIRD-NDFYVCDFKGHCVAVFQDDGTFLYRIGNEKVTCFPNGIDISNAGDVLIGDSHGNR 1133
            .|:.:.:.| .:.::.|.:.|||.||..:|.:|.:||.|.:|.:|.|:.|::.|::||.|:| |.
  Fly   916 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNH-NN 979

  Fly  1134 FHVACYSREGALQSEFECPHVKVSRCCGLKITSEGYVVTLAKNNHHVLVLNTLYVH 1189
            |::..::::|.|.|..| ..||.::|..:.:..:|.||..:|:..       ||::
  Fly   980 FNLTIFTQDGQLISALE-SKVKHAQCFDVALMDDGSVVLASKDYR-------LYIY 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..232 CDD:473075 12/74 (16%)
RING_Ubox 222..266 CDD:473075 3/43 (7%)
Bbox_SF 261..302 CDD:469587 18/41 (44%)
Bbox2_BRAT-like 318..361 CDD:380856 15/49 (31%)
BBC 369..494 CDD:128778 25/126 (20%)
NHL_brat_like 913..1186 CDD:271329 97/273 (36%)
NHL repeat 936..972 CDD:271329 21/35 (60%)
NHL repeat 983..1025 CDD:271329 14/41 (34%)
NHL repeat 1028..1064 CDD:271329 9/35 (26%)
NHL repeat 1068..1107 CDD:271329 12/39 (31%)
NHL repeat 1112..1151 CDD:271329 13/38 (34%)
NHL repeat 1157..1183 CDD:271329 5/25 (20%)
bratNP_001188842.2 Bbox1_BRAT-like 178..222 CDD:380871 19/69 (28%)
Bbox2_BRAT-like 326..366 CDD:380856 15/39 (38%)
CC_brat-like 382..503 CDD:467844 24/123 (20%)
NHL_brat_like 760..1030 CDD:271329 99/278 (36%)
NHL repeat 783..819 CDD:271329 21/35 (60%)
NHL repeat 830..871 CDD:271329 14/41 (34%)
NHL repeat 874..910 CDD:271329 9/35 (26%)
NHL repeat 914..954 CDD:271329 12/39 (31%)
NHL repeat 959..997 CDD:271329 14/39 (36%)
NHL repeat 1002..1027 CDD:271329 7/31 (23%)

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