DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and Trim32

DIOPT Version :9

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:NP_001012103.1 Gene:Trim32 / 313264 RGDID:1305238 Length:655 Species:Rattus norvegicus


Alignment Length:1114 Identity:169/1114 - (15%)
Similarity:304/1114 - (27%) Gaps:542/1114 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SSHGVTELDSLEDSCSGLMIKDGDKLCKLC-------SLRLVMPRILSCLHVFCEDCLQAVVSKD 192
            :||  ..||:|.:...          |.:|       .||   |::|.|.|..|..||:.::   
  Rat     7 ASH--LNLDALREVLE----------CPICMESFTEEQLR---PKLLHCGHTICRQCLEKLL--- 53

  Fly   193 TMSASSPNSCSSSSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKALPCDYIVTNILDLS-NLE 256
                       :||.:|           :.||.|.:.|.              :|::..|: ||.
  Rat    54 -----------ASSING-----------VRCPFCSKITR--------------ITSLTQLTDNLT 82

  Fly   257 SEHIVCTSCKSKEEAISRCNDCANFLCNGCDNAHKYMRCFENHHVVRIEDLTKNVHDKLIIHKPV 321
            ...|:.|:..|:...:..|..|...|                                       
  Rat    83 VLKIIDTAGLSEAVGLLMCRACGRRL--------------------------------------- 108

  Fly   322 FCPQHVSENLKYYCFTCQVPTCNDCLLSDHKGSDHHYETATVAEQAVRADLEETLSDTLKKADYC 386
              |       :.:|.:|.:..|..|..:||:...|.  |..|.|.|     ||      ::.|: 
  Rat   109 --P-------RQFCRSCGLVLCEPCREADHQPPGHC--TLPVKEAA-----EE------RRRDF- 150

  Fly   387 NDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQMLNELGRLHSDRELKIMDLMQSM 451
                   |..||.|                                       |||         
  Rat   151 -------GEKLTRL---------------------------------------REL--------- 160

  Fly   452 ENTMGKLQHAAQFGQRAVDKANSIEFLLLKPIISAQCLNLMEQTPKCDINYQLQFDSKPEMFEQF 516
               .|:||.          :..::|                                        
  Rat   161 ---TGELQR----------RKAALE---------------------------------------- 172

  Fly   517 AREMFGKFQTDHIDSSPKKLGMTQQLQQQQQQQQQLQQQQHQHQHQVQQQQHHHQQQQQQKQQVQ 581
                                |:::.||.               :::...|::.|::::.|::..:
  Rat   173 --------------------GVSRDLQA---------------RYKAVLQEYGHEERRVQEELAR 202

  Fly   582 HQQQQQKLQLQQQQQHQHNSNNLIVGHRGSSSVQGRLTSAVFSPISLPSSLQSSFDGDTNSVMSN 646
            .::                                                  .|.|..      
  Rat   203 SRK--------------------------------------------------FFTGSL------ 211

  Fly   647 FSMMDSPPQPSSQQQLPSAQQQSQQQQQQQQQQQAVVLQQVQQQQKHQQHQVQQQQQQQVLHQPT 711
                              |:.:....|..::|...:.:.:||...:......:.:|....|.:.|
  Rat   212 ------------------AEVEKSNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLEET 258

  Fly   712 SAQSMPQQLGQLVAPQGIVQQAGHVNLNAGPGPNISINGLGAGGPPPSFSMLEYNISRLASLTET 776
            :.:..|:                                                      ||.:
  Rat   259 ADEEEPE------------------------------------------------------LTAS 269

  Fly   777 MPD--TLNDALAVGGGAAGPVPNVVAQVPGGSAVTGAAVVGASHAHQQQSQAVMPASAVTPTQPI 839
            :|.  ||.|...:..|..||:     |:       |.||......:.:.|.||...:|.:.:..:
  Rat   270 LPRELTLQDVELLKVGHVGPL-----QI-------GQAVKKPRTVNMEDSWAVEEGAASSASASV 322

  Fly   840 TLADILSGDQRALNNLQALAKLGLNNNDFCMPPATSPSLQSLNPIVGGVEDMGLNNFHAVAAPGT 904
            |..:                 :.::..:....|..||:.|..:.....::               
  Rat   323 TFRE-----------------MDMSPEEVVPSPRASPAKQRSSEAASSIQ--------------- 355

  Fly   905 TSVVTGRNKATPMQIRC----KFGSLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGA 965
                           :|    |.|:.|:..|.||.|....:....|::|||..|:||:||::.|.
  Rat   356 ---------------QCLFLKKMGAKGSTPGMFNLPVSLYVTSQSEVLVADRGNYRIQVFNRKGF 405

  Fly   966 LK-----------FQFGVAGKEEGQLWYPRKVAVMHNNGKFVVCDRGNERSRMQIFSKCGHFMRK 1019
            ||           |.....|.:...| .|..|| |:.:|...|.|  :..:.:::::..||.   
  Rat   406 LKEIRRSPSGIDSFVLSFLGADLPNL-TPLSVA-MNCHGLIGVTD--SYDNSLKVYTLDGHC--- 463

  Fly  1020 IAIRYIDIVAGLAVTA--KGHIVAVDSVSPTV--FVISEEGELVRWFD-CSDYMREPSDIAIRDN 1079
            :|.....:.....:||  .|..|..|.....:  |.:.....:|::.. ||         |:|..
  Rat   464 VACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGAGVVKYSCLCS---------AVRPK 519

  Fly  1080 DFYVCDFKGHCVAVFQDDGTFL--------------YRIG------------------NEKVTCF 1112
             |..||.:|   .|:...|..|              :.||                  ||...|.
  Rat   520 -FVTCDAEG---TVYFTQGLGLNVENRQNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCI 580

  Fly  1113 PNGIDISNAGDVLIGDSHGNRFHVACYSREGA----LQSEFECPHVKVSRCCGLKITSEGYVVTL 1173
            . |:.:...||:::.||  :|..:..:.:.|.    ::....||       .|:.:|.:|.::.|
  Rat   581 A-GMCVDARGDLIVADS--SRKEILHFPKGGGYSVLIREGLTCP-------VGIALTPKGQLLVL 635

  Fly  1174 AKNNHHVLV 1182
            ...:|.|.:
  Rat   636 DCWDHCVKI 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..230 CDD:354325 17/78 (22%)
BBOX 321..360 CDD:237988 8/38 (21%)
BBC 369..494 CDD:128778 14/124 (11%)
NHL_brat_like 913..1186 CDD:271329 71/326 (22%)
NHL repeat 936..972 CDD:271329 14/46 (30%)
NHL repeat 983..1025 CDD:271329 10/41 (24%)
NHL repeat 1028..1064 CDD:271329 7/40 (18%)
NHL repeat 1068..1107 CDD:271329 11/70 (16%)
NHL repeat 1112..1151 CDD:271329 7/42 (17%)
NHL repeat 1157..1183 CDD:271329 6/26 (23%)
Trim32NP_001012103.1 RING-HC_TRIM32_C-VII 20..66 CDD:319501 16/83 (19%)
Bbox1_TRIM32_C-VII 99..139 CDD:380864 12/89 (13%)
NHL_TRIM32_like 364..646 CDD:271331 69/311 (22%)
NHL repeat 376..416 CDD:271331 13/39 (33%)
NHL repeat 433..472 CDD:271331 10/44 (23%)
NHL repeat 474..514 CDD:271331 7/39 (18%)
NHL repeat 515..566 CDD:271331 11/54 (20%)
NHL repeat 579..611 CDD:271331 8/34 (24%)
NHL repeat 619..645 CDD:271331 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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