Sequence 1: | NP_001356936.1 | Gene: | mei-P26 / 45775 | FlyBaseID: | FBgn0026206 | Length: | 1310 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006228170.1 | Gene: | Trim28 / 116698 | RGDID: | 620289 | Length: | 861 | Species: | Rattus norvegicus |
Alignment Length: | 928 | Identity: | 182/928 - (19%) |
---|---|---|---|
Similarity: | 305/928 - (32%) | Gaps: | 339/928 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 SSSSSSSSSSSSSSGSCSGSGTDTDTGKGSSNVGSLDVTSSSSIGSETSISSTGSTAIAGPSTLL 111
Fly 112 DDSNSSGLGLVVDVDSNGSSQELSSHGVTELDSLEDSCSGLMIKDGDKLCKLCSLRLVM---PRI 173
Fly 174 LSCLHVFCEDCLQAVVSKDTMSASSPNSCSSSSFDGSEHQNRLSAVFIECPVCKQETP------- 231
Fly 232 --LGPKGIKALPCDYIVTNILDLSNLESEHIVCTSCKSKEEAISRCNDCANFLCNGCDNAHKYMR 294
Fly 295 CFENHHVVRIEDLTKNVHDKLIIHKPVFCPQHVSENLKYYCFTCQVPTCNDCLLSDHKGSDHHYE 359
Fly 360 TATVAEQAVRADLEETLSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLES 424
Fly 425 IKDQM------LNELGRLHSDRELKIMDLMQS-MEN---TMGKLQ----HAAQFGQRAVDKANSI 475
Fly 476 EFLLLKPIISAQCLNLMEQ-----TPKCDINYQLQFDSKPEMFEQFAREMFGKFQTDHIDSSPKK 535
Fly 536 LGMTQQLQQQQQQQQQLQQQQHQHQHQVQQQQHHHQQQQQQKQQVQHQQQQQKLQLQQQQQHQHN 600
Fly 601 SNNLIVGHRGSSSVQGRLTSAVFSPISLPSSLQSSFDGDTN--SVMSNFSMMDSPPQPSSQQQLP 663
Fly 664 SAQQQSQQQQQQQQQQQAVVLQQVQQQQKHQQHQVQQQQQQQVLHQPTSAQSMPQQLGQLVAPQG 728
Fly 729 IVQQAGHVNLNAGPGPNISINGLGAGGPPPSFSML------EYNISRLASLTETMPDTLNDALAV 787
Fly 788 GGGAAGPVPNVVAQVPGGSAVTGAAVVGASHAHQQQSQAVMPASAVTP----TQPITLADILSGD 848
Fly 849 QRALNNLQALAKLGLNNNDFCMPPATSPSLQSLNPIVGGVEDMGLNNFHAVAAPGTTSV-VTG-- 910
Fly 911 --RNKATPMQIRCKFGSL 926 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mei-P26 | NP_001356936.1 | RING_Ubox | 158..230 | CDD:354325 | 24/74 (32%) |
BBOX | 321..360 | CDD:237988 | 17/38 (45%) | ||
BBC | 369..494 | CDD:128778 | 33/138 (24%) | ||
NHL_brat_like | 913..1186 | CDD:271329 | 5/14 (36%) | ||
NHL repeat | 936..972 | CDD:271329 | |||
NHL repeat | 983..1025 | CDD:271329 | |||
NHL repeat | 1028..1064 | CDD:271329 | |||
NHL repeat | 1068..1107 | CDD:271329 | |||
NHL repeat | 1112..1151 | CDD:271329 | |||
NHL repeat | 1157..1183 | CDD:271329 | |||
Trim28 | XP_006228170.1 | zf-RING_5 | 66..124 | CDD:291308 | 23/93 (25%) |
BBOX | 150..186 | CDD:197662 | 13/35 (37%) | ||
BBOX | 209..247 | CDD:237988 | 17/42 (40%) | ||
BBC | 254..380 | CDD:128778 | 32/135 (24%) | ||
PHD_TIF1beta | 628..670 | CDD:277093 | 3/11 (27%) | ||
Bromodomain | 697..829 | CDD:295360 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |