DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and rnf207

DIOPT Version :9

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:XP_002937592.3 Gene:rnf207 / 100487154 XenbaseID:XB-GENE-6043644 Length:639 Species:Xenopus tropicalis


Alignment Length:621 Identity:123/621 - (19%)
Similarity:223/621 - (35%) Gaps:147/621 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 SHGV-TELDSLED----SCSGLMIKDGDKLCKLCSLRLVMPRILSCLHVFCEDCLQAVVSKDTMS 195
            |.|: :.|::|.|    :|..|       .|.||..:...|.:|.|.|.||..||:         
 Frog     2 SGGIFSPLENLHDLDKATCHPL-------ACFLCHEQYEHPCLLDCYHNFCASCLR--------- 50

  Fly   196 ASSPNSCSSSSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKAL-PCDYIVTNILDLSNLESEH 259
                         |....|||:     ||:|..::.:  ||...| |.|.::..::|.|:...|.
 Frog    51 -------------GRAIDNRLT-----CPLCGHQSIV--KGNNGLPPVDRLLQFLVDSSSDFDEV 95

  Fly   260 IVCTSC-----KSKEEAISRCNDCANFLCNGC-DNAHKYMRCFENHHVVRIEDLTKNVHDKLIIH 318
            :.|.:|     |...|.:..||.|...||..| |..|| .:.|..|.:|.:....|:::.|..:|
 Frog    96 VQCANCDLECKKQDGEIMYYCNTCNQPLCVKCRDETHK-AKMFSRHEIVSLAKRAKDIYKKCSLH 159

  Fly   319 KPVFCPQHVSENLKYYCFTC----QVPTCNDCLLSDHKGSDHHYETATV-----AEQAVRADLEE 374
            :..:. ...:|.....|..|    ||.:...|:         ..|||.:     .:|||.| ::|
 Frog   160 EEPYI-MFSTEKKSMLCINCFRDMQVESRAHCI---------DIETAYMQGCEKLDQAVMA-VKE 213

  Fly   375 TLSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKRMLESIKDQMLNELGRLHSD 439
            ..:.|       .:|...|.:.:.|:::..|.....|...:...:..|...:..:|..:...|.:
 Frog   214 LQTST-------REAIVLLKAMIEEVRNSADEEETSINTLFSNMQEKLADRRKILLKAVQCQHEE 271

  Fly   440 RELKIMDLMQSMENTMGKLQHAAQFGQRAVDKANSIEFLLLKPIISAQCLNLME----------- 493
            :|....:.:..:.:.:..||.........:..||..|||.|.       ..|||           
 Frog   272 KEKTFKEQLSHLASLLPTLQVHLVTCSAFLSTANKAEFLDLG-------YQLMERLQKIVKLPHR 329

  Fly   494 ----QTPKCDINYQLQFDS--KPEMFEQFAR----------------EMFGKFQTDH------ID 530
                |:.|.:.::..:|..  :|.:.....|                .|....|:..      ..
 Frog   330 LRPYQSSKINTDFGAEFARCLEPLLMLNLRRGGSVSGSCGGPGLSNGSMISSGQSSKTLIMPGCS 394

  Fly   531 SSPKKLGMTQQLQQQQQQQQQLQQQQHQHQHQVQQQQHHHQQQQQQKQQVQHQQQQQKLQLQQQQ 595
            ||..|:.:|..:.::....:.:..:....:.:......|.:..:...:.:|.:.|..|.|:|:..
 Frog   395 SSVDKMSITGSIVRKPTMHRYISTKVLLAEGEENPFTKHCRSYEDMYRAIQLEIQNLKDQVQELH 459

  Fly   596 QHQHNSNNLIVGHRGSSSVQGRLTSAVFSPISLPSSLQSSFDGDTNSVMSNFSMM---------D 651
            :.....::||.....|..:|              .|||  .|....|..|:..||         :
 Frog   460 RDLTKHHSLIKTDTMSEIIQ--------------KSLQ--VDVQIASEYSSVEMMRTAFEEIWEE 508

  Fly   652 SPPQPSSQQQLPSAQQQSQQQQQQQQQQQAVVLQQV 687
            :..:.:::|::..||....||.:|:......:.:|:
 Frog   509 TYQRVANEQEIYEAQLHDLQQLKQENSFLTTIAKQI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..230 CDD:354325 18/71 (25%)
BBOX 321..360 CDD:237988 6/42 (14%)
BBC 369..494 CDD:128778 23/139 (17%)
NHL_brat_like 913..1186 CDD:271329
NHL repeat 936..972 CDD:271329
NHL repeat 983..1025 CDD:271329
NHL repeat 1028..1064 CDD:271329
NHL repeat 1068..1107 CDD:271329
NHL repeat 1112..1151 CDD:271329
NHL repeat 1157..1183 CDD:271329
rnf207XP_002937592.3 RING-HC_RNF207 22..64 CDD:319472 18/75 (24%)
Bbox1_RNF207-like 97..150 CDD:380872 16/53 (30%)
BBC 202..322 CDD:128778 26/134 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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