DRSC/TRiP Functional Genomics Resources

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Protein Alignment mei-P26 and trim71

DIOPT Version :10

Sequence 1:NP_001356936.1 Gene:mei-P26 / 45775 FlyBaseID:FBgn0026206 Length:1310 Species:Drosophila melanogaster
Sequence 2:XP_004915429.1 Gene:trim71 / 100486898 XenbaseID:XB-GENE-6035039 Length:853 Species:Xenopus tropicalis


Alignment Length:1200 Identity:230/1200 - (19%)
Similarity:374/1200 - (31%) Gaps:484/1200 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SSSSSSSSSSSSSSGSCSGSGTDTDTGKGSSNVGSLDVTSSSSIGSETSISSTGSTAIAG--PST 109
            ||:..|||||||||...|                    |||||.|     |:.|.|.:|.  |..
 Frog    21 SSAPISSSSSSSSSSQVS--------------------TSSSSAG-----SAGGGTGLASAPPRR 60

  Fly   110 LLDDSNSSGLGLVVDVDSNGSSQELSSHGVTELDSLEDSCSGLMIKDGDKLCKLCSLRLVMPRIL 174
            |                                                             .:|
 Frog    61 L-------------------------------------------------------------HVL 64

  Fly   175 SCLHVFCEDCLQAVVSKDTMSASSPNSCSSSSFDGSEHQNRLSAVFIECPVCKQETPLGPKGIKA 239
            .|||.||..||:        ...||.                .::.:.||||..:..:...|:.|
 Frog    65 PCLHAFCRQCLE--------GRRSPG----------------DSLQLRCPVCDHKVLISEAGMDA 105

  Fly   240 LPCDYIVTNILDLSNL-----------------------------------------ESEHIVCT 263
            ||.    :..|.||||                                         :||. .|:
 Frog   106 LPS----STFLHLSNLLDAVVGAADEQQQSNGGRTASNRQRSASCSSSGLLRRAPPSQSEP-RCS 165

  Fly   264 SCKSKEEAISRCNDCANFLCNGCDNAHKYMRCFENHHVVRI---------------EDLTKNVHD 313
            ||.....|.|.|.||...||:.|..||:.:|..::|.:.|.               ...:.:...
 Frog   166 SCDDGNGASSHCLDCQENLCDNCLRAHQRVRLTKDHFIERFPASPCSSAASSAATTSSSSSSAFS 230

  Fly   314 KLIIH-KPVFCPQHVSENLK----------------------YYCFTCQVPTCNDCLLSDHKGSD 355
            .|.:: :.::|.||..|..|                      :||.:|.||.|.:|.:..|.|..
 Frog   231 LLPVYPERLYCQQHDEEIYKFGIRKRVYTLADLVRIKDWVLHFYCDSCSVPICRECTMGRHAGHS 295

  Fly   356 HHYETATVAEQAVRADLEETLSDTLKKADYCNDAGSNLGSALTELQSQHDTVRQQIEDAYKCYKR 420
            ..|             |:|.|.|:               .|||                      
 Frog   296 FVY-------------LQEALQDS---------------RALT---------------------- 310

  Fly   421 MLESIKDQMLNELGRLHSDRELKIMDLMQSMENTMGKLQHAAQFGQRAVDKANSIEFLLLKPIIS 485
             ::.:.|                                  ||.|::|:                
 Frog   311 -IQLLAD----------------------------------AQQGRQAI---------------- 324

  Fly   486 AQCLNLMEQTPKCDINYQLQFDSKPEMFEQFAREMFGKFQTDHIDSSPKKLGMTQQLQQQQQQQQ 550
                             ||                                    .|:|.|...:
 Frog   325 -----------------QL------------------------------------SLEQAQALAE 336

  Fly   551 QLQQQQHQHQHQVQQQQHHHQQQQQQKQ-----QVQHQQQQQKLQLQQQQQHQHNSNNLIVGHRG 610
            |::.:....|.:::.....|::..::::     :|:..:|.:...|..|.:..|.:.|       
 Frog   337 QVEMKAKVVQSEIKAVTSRHKKALEERECELLWKVEKIRQVKAKSLYHQVEKLHQALN------- 394

  Fly   611 SSSVQGRLTSAVFSPISLPSSLQSSFDGDTNSVMSNFSMMDSPPQPSSQQQLPSAQQQSQQQQQQ 675
                            .|.|::.:     ...|:.....||          :..|:.:       
 Frog   395 ----------------KLDSTINA-----VQQVLEEGCTMD----------ILIARDR------- 421

  Fly   676 QQQQQAVVLQQVQQQQKHQQHQVQQQQQQQVLHQPTSAQSMPQQLGQLVAPQGIVQQAGHVNLNA 740
                   ||.|| |..|:.:..:|.|:..:::..|..     |.|...:...|:|.......|..
 Frog   422 -------VLAQV-QDVKNARGLLQLQEDDRIMFTPPD-----QALYLAIKSLGLVSSGAFAALTK 473

  Fly   741 GPGPNISINGLGAGGPPPSFSMLEYNISRLASLTETMPDTLNDALAVGGG-----AAGPVPNV-V 799
            ..|..:.   ....|...||:::.|             |...:|...||.     ..||..|: .
 Frog   474 ATGEGLK---RALQGKVASFTVIGY-------------DHDGEARLSGGDLITVLVMGPDGNLFA 522

  Fly   800 AQVPGGSAVTGAAVVGASHAHQQQSQ---AVMPASAVTPTQPITLADILSGDQRALNNLQALAKL 861
            |:|  ...:.|..:|  |:..|.:.:   :||..:......|..: ::.||.......|..|:..
 Frog   523 AEV--SDQLNGTYLV--SYRPQLEGEHLISVMVCNQHIENSPFKV-NVKSGRCYLGIGLPTLSFG 582

  Fly   862 GLNNND--FCMPPATSPSLQSLNPIVGGVEDMGLNNFHAVAAPGTTSVVTGRNKATPMQIRCKFG 924
            |..::|  .|.|.......:..  |:  |.|...|........||              ...|||
 Frog   583 GEGDHDGKLCRPWGVCVDREGY--II--VADRSNNRVQIFKPCGT--------------FHHKFG 629

  Fly   925 SLGTAKGQFNSPHGFCLGVDEEIIVADTNNHRIEVFDKMGALKFQFGVAGKEEGQLWYPRKVAVM 989
            |||:..|||:.|.|........|:|||.:|||:::|...|....:||..|.:.||..||..||| 
 Frog   630 SLGSRPGQFDRPAGVACDNSRRIVVADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAV- 693

  Fly   990 HNNGKFVVCDRGNERSRMQIFSKCGHFMRKIAI-----RYIDIVAGLAVTAKGHIVAVDSVSPTV 1049
            ::.||.:|.|..|.  |:|:|...|.|:.|...     ::.|...|:|.:..|::|..|..:..:
 Frog   694 NSEGKILVSDTRNH--RVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNNHRL 756

  Fly  1050 FVISEEGELVRWFDC-----SDYMREPSDIAI-RDNDFYVCDFKGHCVAVFQDDGTFLYRIGNEK 1108
            .:|..:.:...:...     ..::| |..:|: ::....|.|.:.|.|.:|:.:|:||.:.|.:.
 Frog   757 LIIKPDCQSAHFLGTEGTGNGQFLR-PQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQG 820

  Fly  1109 VTCF-----PNGIDISNAGDVLIGDSHGNR 1133
             :.|     |:||.::..|.:::.|...||
 Frog   821 -SGFGQMDRPSGIAVTPDGTIVVVDFGNNR 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mei-P26NP_001356936.1 RING_Ubox 158..232 CDD:473075 14/73 (19%)
RING_Ubox 222..266 CDD:473075 17/84 (20%)
Bbox_SF 261..302 CDD:469587 15/40 (38%)
Bbox2_BRAT-like 318..361 CDD:380856 15/65 (23%)
BBC 369..494 CDD:128778 12/124 (10%)
NHL_brat_like 913..1186 CDD:271329 67/236 (28%)
NHL repeat 936..972 CDD:271329 12/35 (34%)
NHL repeat 983..1025 CDD:271329 15/46 (33%)
NHL repeat 1028..1064 CDD:271329 6/35 (17%)
NHL repeat 1068..1107 CDD:271329 12/39 (31%)
NHL repeat 1112..1151 CDD:271329 7/26 (27%)
NHL repeat 1157..1183 CDD:271329
trim71XP_004915429.1 RING-HC_TRIM71_C-VII 1..100 CDD:438251 38/188 (20%)
Bbox1_TRIM71_C-VII 163..206 CDD:380870 15/42 (36%)
Bbox2_TRIM71_C-VII 240..307 CDD:380854 19/94 (20%)
CC_brat-like 312..427 CDD:475168 29/270 (11%)
Filamin 467..562 CDD:395505 22/114 (19%)
NHL_TRIM71_like 569..853 CDD:271324 79/303 (26%)
NHL repeat 594..633 CDD:271324 12/56 (21%)
NHL repeat 641..680 CDD:271324 13/38 (34%)
NHL repeat 688..724 CDD:271324 15/38 (39%)
WD40 repeat 689..725 CDD:293791 14/38 (37%)
NHL repeat 732..772 CDD:271324 7/39 (18%)
NHL repeat 781..811 CDD:271324 8/30 (27%)
NHL repeat 827..853 CDD:271324 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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