DRSC/TRiP Functional Genomics Resources

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Protein Alignment LOC4576491 and Amfr

DIOPT Version :10

Sequence 1:XP_061506956.1 Gene:LOC4576491 / 4576491 VectorBaseID:AGAMI1_013392 Length:841 Species:Anopheles gambiae
Sequence 2:NP_035917.2 Gene:Amfr / 23802 MGIID:1345634 Length:639 Species:Mus musculus


Alignment Length:676 Identity:286/676 - (42%)
Similarity:397/676 - (58%) Gaps:115/676 - (17%)


- Green bases have known domain annotations that are detailed below.


Mosquito   128 LRQMLQGGGS----DAPDEDDAREVEEGDERWLVVGNDTRSLGAYLKDTASFMATEPFCIWTLIN 188
            |.|...|.|.    .||.:.:||         |..|      |...:|.|.::.::...:|.|:|
Mouse    36 LSQPEDGSGEPEPLTAPLQPEAR---------LTAG------GPRARDVAQYLLSDSLFVWVLVN 85

Mosquito   189 TAYCCLILLGKSIQKFVFGELRISEQQHMKDKFWNFIFYKFIFVFGVVNVQYLYEVILWVSWFSA 253
            ||.|.|:|:.|.||..|||.||:||:||:||||||||||||||:|||:|||.:.||::|..||:.
Mouse    86 TACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAG 150

Mosquito   254 LGFLHLLSQLSKDRFEYLSFSPTTPGWSHFRLISLLVAILALSGLMVGISIGVGVFFGGFNTFAF 318
            |.||||:.||.||||||||||||||..||.|::|||:|:| ||...:.:...|..:..|.:|.||
Mouse   151 LVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAML-LSCCGLAVVCCVTGYTHGMHTLAF 214

Mosquito   319 MAAECILLSIRTLHVLIRYGMFLHDMRQGGIANESFSSFPAISWDKRGPVAYYIELTFEVAALMV 383
            ||||.:|:::||.||::||.:.|.|:...|            :|:.:|...||.:...|:|.|.:
Mouse   215 MAAESLLVTVRTAHVILRYVIHLWDLNHEG------------TWEGKGTYVYYTDFVMELALLSL 267

Mosquito   384 ELVHYIHMMLWSNIFLSMASLVILMQLRYLLNEIQRKIKKHRNYLWVLNHMEKSYPLASSDDLKQ 448
            :|:|:|||:|:.||:||||||||.||||||.:|:||:|::|:|||.|:.:||..:.:|:.::|..
Mouse   268 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAV 332

Mosquito   449 NSDNCAICWEKMETARKLPCAHLFHNSCLQSWLEQDTSCPTCRLGLSVHQNGGPRGSPLLPDDIR 513
            |:|:|||||:.|:.||||||.||||||||:|||||||||||||:.|::......|      :|.:
Mouse   333 NNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADGSRAR------EDHQ 391

Mosquito   514 ---IDDQDGAVGGGGGR---TANNHFFHFNGSRYVSWLPNFSVEVTHINSMLRPSETLPITAAAV 572
               :|:....|....||   ..:||||||:|||..||||:|||||.|..::      |.||.|: 
Mouse   392 GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNI------LGITQAS- 449

Mosquito   573 GNHTSQVRNMARHVQEMFPRYPLSVLIGDLQISRSIEVTIDNILEGRLQVP------------AN 625
               .||:..||..:|||||:.|..:::.|||::||:|:|.|||||||:|||            .|
Mouse   450 ---NSQLNAMAHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILEGRIQVPFPTQRSDSLRPALN 511

Mosquito   626 SPEDEDEETL--GAASVASMAMSGSMDGDNGDDDDELSGELSTRSLTNSLSASSLSSLSSPAGYE 688
            ||.:.....|  |.|||.:               :.:..:||.| |..:|..|           |
Mouse   512 SPVERPSPDLEEGEASVQT---------------ERVPLDLSPR-LEETLDFS-----------E 549

Mosquito   689 VERGTNIFGNYDALLRDDTVEEISSATSVPLGDRFSKSPEEREKILQRRKEQLLAMARRRYLEKN 753
            ||            |....||:..:.     |.|||||.:||:::|.:||:.||..||:|:|.|:
Mouse   550 VE------------LEPIEVEDFEAR-----GSRFSKSADERQRMLVQRKDDLLQQARKRFLNKS 597

Mosquito   754 KSELNHQPSTSATASTSS---TVRHR 776
            ..:.........:..|||   |:|.|
Mouse   598 SEDDGASERLLPSEGTSSDPVTLRRR 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LOC4576491XP_061506956.1 None
AmfrNP_035917.2 HRD1 82..>378 CDD:227568 171/308 (56%)
RING-H2_AMFR 335..378 CDD:438119 34/42 (81%)
CUE_AMFR 454..494 CDD:270604 21/39 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..531 8/45 (18%)
G2BR 571..596 CDD:375868 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..620 5/25 (20%)
VCP/p97-interacting motif (VIM). /evidence=ECO:0000250|UniProtKB:Q9UKV5 618..636 3/6 (50%)

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