Sequence 1: | NP_524836.2 | Gene: | beta'COP / 45757 | FlyBaseID: | FBgn0025724 | Length: | 914 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_176393.1 | Gene: | AT1G62020 / 842497 | AraportID: | AT1G62020 | Length: | 1216 | Species: | Arabidopsis thaliana |
Alignment Length: | 992 | Identity: | 241/992 - (24%) |
---|---|---|---|
Similarity: | 420/992 - (42%) | Gaps: | 233/992 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARKNWILT 74
Fly 75 GSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFE 139
Fly 140 GHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGS---------------------------NFA 177
Fly 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNISAVCFHP 239
Fly 240 ELPIVLTGSEDGTVRIWHS------GTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIK 298
Fly 299 VGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDGERLPVATKDMGACEIYPQTIAHN 363
Fly 364 PNGRFVVVCGD---GEYIIY--------TSMALRNKAFGSAQEFVWALESNEYAIRENNGTVRLF 417
Fly 418 RNFKE---RKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNVFWNESGSLV 479
Fly 480 CLATD-------DSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVL----GEVSEC-------V 526
Fly 527 KTGLWVGD-CFIYTNSVNRINYYV-GGEIVTVSHLDRTMYLLGYVPK--DNRIYLGDKE------ 581
Fly 582 -LNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEH---RTRVAHFLEKQGFKSQALQVSTD 642
Fly 643 ADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTA 707
Fly 708 SGD----AQLLEVVGAAGSAQGH-HNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTYLPSQ 767
Fly 768 MSRIVELWREKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLN 832
Fly 833 -SERHPLQE---------LFAAEQGAAGQHLEEKVKPAYVPAQAVVSSSQVAEPTSAADDDDDLD 887
Fly 888 LEIDGITLDDNIDTTDV 904 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
beta'COP | NP_524836.2 | WD40 | 8..378 | CDD:225201 | 122/406 (30%) |
WD40 | 8..297 | CDD:238121 | 104/322 (32%) | ||
WD40 repeat | 20..55 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 61..97 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 102..139 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 146..182 | CDD:293791 | 14/62 (23%) | ||
WD40 repeat | 188..226 | CDD:293791 | 16/40 (40%) | ||
Coatomer_WDAD | 321..765 | CDD:281977 | 102/494 (21%) | ||
AT1G62020 | NP_176393.1 | WD40 | 9..317 | CDD:238121 | 104/318 (33%) |
WD40 repeat | 15..49 | CDD:293791 | 9/33 (27%) | ||
WD40 repeat | 55..91 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 96..132 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 139..201 | CDD:293791 | 14/62 (23%) | ||
WD40 repeat | 207..245 | CDD:293791 | 16/40 (40%) | ||
WD40 repeat | 251..288 | CDD:293791 | 11/36 (31%) | ||
Coatomer_WDAD | 337..769 | CDD:367786 | 102/509 (20%) | ||
COPI_C | 816..1210 | CDD:369149 | 15/70 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D139008at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |