DRSC/TRiP Functional Genomics Resources

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Protein Alignment FarO and CER4

DIOPT Version :10

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_567936.5 Gene:CER4 / 829521 AraportID:AT4G33790 Length:493 Species:Arabidopsis thaliana


Alignment Length:487 Identity:124/487 - (25%)
Similarity:212/487 - (43%) Gaps:76/487 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSGEME-----EFFEDSEIFVTGGSGVVGKALVEKLLR-SCNVRRIYVLLRPRKQLTAEQRL-VR 62
            :|.|||     ::.::..|.|.|.:|.:....|||:|| :.||:::|:|||..|..:|.||. ..
plant     1 MSTEMEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFNDE 65

  Fly    63 LRQATVFHVLAVQKPEEL-----DKIVAVPGDVSLPGLGI-DPSMMQRM-KGVSLVYHCAATVRF 120
            :.:..:|.||..:....|     :||..|.||:.|..||: |..:...| ..|..:.:.|||.:|
plant    66 ILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLAATTKF 130

  Fly   121 DEPLREAVRLNVGGTLEALKFAETLPQLRAFIHVSTFY----------SNPY--------LTRVE 167
            ||....|:.:|..|.|..|.||:...:::..:||||.|          ..||        .|.::
plant   131 DERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMGETLNGTTGLD 195

  Fly   168 PKYYSSPMDWRL-CLRMI--------DDVADDGMLNALTRKLIMGFPNTYTFTKNLAESLVNDYR 223
            ..|....:..:| .||:|        :.:.|.|    |.|..:.|:||||.|||.:.|.:|...|
plant   196 INYEKKLVQEKLDQLRVIGAAPETITETMKDLG----LRRAKMYGWPNTYVFTKAMGEMMVGTKR 256

  Fly   224 HRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVGAGILKTVYLGKDIRLDITPQDIGIKS 288
            ..|.:::.||||:....::|.||::..:.....|....|.|.|.......|...|:.|.|:.:.|
plant   257 ENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNS 321

  Fly   289 MLCYT-----KMGYDIYRQGPPADLPVFLSSSCTHVPHTFTQIAEQMDTLDLWRDV--------A 340
            :|...     |....||..|.....|:..|.        |.::|.:..::..|.:.        |
plant   322 ILVSMAAQAGKQEEIIYHVGSSLRNPMKNSK--------FPELAYRYFSIKPWTNKEGKVVKVGA 378

  Fly   341 FEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILDLLLRIFGQK-PVLMSAVRKAYQTLEVMQPF 404
            .|   ::.......:....::|:..|.:  .|:..:|.::|.:: ......:...::.:::.||:
plant   379 IE---ILSSMRSFHRYMTIRYLIALKGL--ELVNIILCKLFEKEFQYFNKKINFIFRLVDLYQPY 438

  Fly   405 MF--NNWDSPGVSDM-ETLSKHG-EGSAFNFD 432
            :|  ..:|......: :.:||.| |...|.||
plant   439 LFFYGIFDDSNTEKLRKMVSKTGVENEMFYFD 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 100/350 (29%)
Sterile 379..>410 CDD:460779 4/33 (12%)
CER4NP_567936.5 PLN02996 6..493 CDD:215538 121/482 (25%)

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