DRSC/TRiP Functional Genomics Resources

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Protein Alignment FarO and FAR8

DIOPT Version :10

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_190042.2 Gene:FAR8 / 823581 AraportID:AT3G44560 Length:496 Species:Arabidopsis thaliana


Alignment Length:530 Identity:120/530 - (22%)
Similarity:217/530 - (40%) Gaps:121/530 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FFEDSEIFVTGGSGVVGKALVEKLLR-SCNVRRIYVLLRPRKQLTAEQRL-VRLRQATVFHVLAV 74
            |.::..|.|||.:|.:.|..|||:|| ..||.::|:::|......|.:|| ....:..:|.||..
plant     8 FLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLFKVLRD 72

  Fly    75 QKPEE------LDKIVAVPGDVSLPGLGI-DPSMMQRM-KGVSLVYHCAATVRFDEPLREAVRLN 131
            ...:|      .:|:|.|.||:::..||: |.::.:|| |.:.:|.:.|||..|||.....:.:|
plant    73 NLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGIN 137

  Fly   132 VGGTLEALKFAETLPQLRAFIHVSTFY---SNPYLTRVEPKYYSS-----------PMDWRLCLR 182
            ..|.|..|.||:...:.:..:||||.|   ..|.|...:|.....           .::..|..:
plant   138 TFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEICNENGLQLDINLERELMKQ 202

  Fly   183 MIDDVADDGMLN----------ALTRKLIMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVL 237
            .:.::.:.|...          .:.|..:.|:||||.|||::.|.|:.:::..||:::.||:::.
plant   203 RLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKSMGEMLLGNHKENLPLVIIRPTMIT 267

  Fly   238 FAVEDPSPGFSPSLMGAMGLFALVGAGILKTVYLGKDIRLDITPQDIGIKSML--CYTKMG---- 296
            ..:.:|.||:...|.....:....|.|:||...:..:...|:.|.|:...:|:  ..|..|    
plant   268 STLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAATHAGGSKV 332

  Fly   297 YDIYRQGPPADLPVFLSSSCTHVPHTFTQIAEQMDTLDLWRDVAFEKNLMIPGCHYTD----KRW 357
            :.:|:.|.....|:.           :.:|          |::.|        |::|.    .|.
plant   333 HMVYQVGSSHQNPII-----------YGEI----------REILF--------CYFTKNSLRSRN 368

  Fly   358 AYQFLVFTKQILPALIL-DLLLRIFGQKPV-LMSAVRKAYQTLE-------------------VM 401
            .....|...:::|.|.| .|.:.|..:.|| |:..|...|.:.|                   :.
plant   369 GSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMVMRLVKLY 433

  Fly   402 QPFMF-------NNWDSPGVSDMETLSKHGEGSAFNFDA--------FNHPDIHGLVIQSCSNML 451
            :|::.       .|..:......|..:::.|...|:||.        ..:..|.||:        
plant   434 EPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLINVHIPGLI-------- 490

  Fly   452 HSIRTHLLRE 461
                ||:|::
plant   491 ----THVLKK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 89/349 (26%)
Sterile 379..>410 CDD:460779 9/57 (16%)
FAR8NP_190042.2 PLN02996 1..495 CDD:215538 119/527 (23%)

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