DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FarO and CG30427

DIOPT Version :9

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001246512.1 Gene:CG30427 / 37986 FlyBaseID:FBgn0043792 Length:506 Species:Drosophila melanogaster


Alignment Length:493 Identity:142/493 - (28%)
Similarity:255/493 - (51%) Gaps:18/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MEEFFEDSEIFVTGGSGVVGKALVEKLLRSC-NVRRIYVLLRPRKQLTAEQRLVRLRQATVFHVL 72
            ::|:::|..||:||.||.:||.|:||||.|| :::.:.::.||::....|.||..:.:..:|..:
  Fly     8 VQEYYKDKTIFITGASGFMGKVLLEKLLYSCHSLKEVIIICRPKRGKAPETRLEEMFKLPIFQRI 72

  Fly    73 AVQKPEELDKIVAVPGDVSLPGLGIDPSMMQRM-KGVSLVYHCAATVRFDEPLREAVRLNVGGTL 136
            ..::||.|.::....|||:...||:....::.: :..::|:|.|||::.:..||:|:.:|:.||.
  Fly    73 KDERPEMLKRVTIYQGDVTFDQLGLSGESLKHVTENTNIVFHMAATLKLEGNLRDAIDMNLLGTR 137

  Fly   137 EALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLCLRMIDDVADDGMLNALTRKLI 201
            .||..|:.:.||.||||:||.:.|.....:..|.|..|......:|:.:.: |...|:|:|..|:
  Fly   138 RALNVAKEMKQLEAFIHLSTAFCNCDQDVMYEKVYEFPHKPEDLMRLAEWM-DVKTLDAITPDLL 201

  Fly   202 MGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVGAGIL 266
            ...|||||::|.|||.||.|:...:|||:.|||||..||.:|.||:..::.|..|:....|.|::
  Fly   202 KPHPNTYTYSKRLAELLVRDHYESMPVIIARPSIVTPAVAEPLPGWVDNMNGPTGVLIGAGKGVI 266

  Fly   267 KTVYLGKDIRLDITPQDIGIKSMLCYTKMGYDIYRQGPPADLPVFLSSSCTHVPHTFTQIAEQMD 331
            :::....:::.::.|.||.|..::....  ::...:..|..:||:..:.......|:..|     
  Fly   267 RSMICNGELKSEVIPVDIAINGLILLPY--HNSLAEKRPLQIPVYNLTVDDAKKRTWKWI----- 324

  Fly   332 TLDLWRDVA----FEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILDLLLRIFGQKPVLMSAVR 392
             :|:.||:.    ||..|..|..:.|..::.:.........|||.::|.||.||||:..::....
  Fly   325 -MDVGRDLGIKYPFEVGLWYPDGNMTSSKFYHTICTILFMWLPAYLIDFLLLIFGQRRFMIRVQT 388

  Fly   393 KAYQTLEVMQPFMFNNWDSPGVSDMETLSKHGEGSAFNFDAFNHPDIHGLVIQSCSNMLHSIRTH 457
            |....|||:|.|...:||... :..|.:.|....:.......|..|:........|  :...|.:
  Fly   389 KIAVGLEVLQFFTTRSWDFKS-THFEQIYKELGSTDRRIFKINTDDVDDYEYMKVS--ILGGRQY 450

  Fly   458 LLREDPKTLERSKRILRIKVFLYRLLRLFLLYKLILWL 495
            :::|...:|.:|:..||....|.|:.:..::..|:.|:
  Fly   451 VMKEPLTSLPKSRIQLRFMYVLDRICKTMIISGLLYWV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 99/311 (32%)
FAR_C 379..>410 CDD:296071 10/30 (33%)
CG30427NP_001246512.1 FAR-N_SDR_e 15..321 CDD:187547 97/308 (31%)
Sterile 364..453 CDD:281068 24/91 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466738
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.850

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