DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FarO and CG10097

DIOPT Version :9

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001027182.1 Gene:CG10097 / 3771756 FlyBaseID:FBgn0038033 Length:501 Species:Drosophila melanogaster


Alignment Length:516 Identity:145/516 - (28%)
Similarity:254/516 - (49%) Gaps:49/516 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSGEMEEFFEDSEIFVTGGSGVVGKALVEKLLRSCNVRRIYVLLRPRKQLTAEQRLVRLRQATVF 69
            ::.|:..|::|..:|:|||:|::||.:||||||:.:|:|||.|:|.::....|.|....::..||
  Fly     1 MTSEIISFYKDKTVFITGGTGLLGKVVVEKLLRATDVKRIYFLVRTKRGEKMEARFESWKKDQVF 65

  Fly    70 HVLAVQKPEELDKIVAVPGDVSLPGLGIDPSMMQRMKG-VSLVYHCAATVRFDEPLREAVRLNVG 133
            .||..:.|..|:|:..:.||...|.|||..:..:.:.. |.::.|.||:|||:|||..||.:|..
  Fly    66 EVLLNKNPLALEKMTPISGDCCAPDLGISETDRRILAAEVQVLIHGAASVRFEEPLEHAVVINTR 130

  Fly   134 GTLEALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYY----SSPMDWRLCLRMIDDVADDGMLN 194
            ......:.|:.:..|.:|:||||.:||..:.:::.::|    |.|:|  ..|.|.:.|:.: ...
  Fly   131 AVRLITQLAKEMRLLESFVHVSTAFSNCVVDQIQERFYPEHLSCPVD--KVLDMHNSVSSE-TFE 192

  Fly   195 ALTRKLIMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFA 259
            .:...||..||||||:||.|.|.::.:....|||.::||:|:|...::|..|:...|.|.:.:..
  Fly   193 KMAPALIGKFPNTYTYTKALGEQVIQEEAKGLPVGIFRPAIILSTFKEPVQGWVDGLQGLIAMIF 257

  Fly   260 LVGAGILKTVYLGKDIRLDITPQD----IGIKSMLCYTKMGYDIYRQGPPADLPVFLSSSCTHVP 320
            ....|.:..:.:...:...|.|.|    :.|.|.:...|:... .:.|||   |::         
  Fly   258 ATAYGFVHLLLVNLKVNAPIVPVDYCVNVAIASAVQIAKISKQ-NKNGPP---PIY--------- 309

  Fly   321 HTFTQIAEQMDTLDLWRDVAFEKNLMIPGC--------HYTDKRWAYQFLVFTKQILPALILDLL 377
             .||.....:.|.:....:.::..|.:|..        |.|...:.|...:....:||..:||::
  Fly   310 -AFTPSESNLVTYEDLAGLCYQNGLEVPNAKMIWYPFTHCTRCPYLYNIGILFYHMLPGYLLDIV 373

  Fly   378 LRIFGQKPVLMSAVRKAYQTLEVMQPFMFNNW--DSPGVSDMETLSKHGEGSAFNFD--AFNHPD 438
            ||:.||||:::.:..|.::.:..:.||....:  |....::|.......|...||||  ..|..:
  Fly   374 LRLKGQKPMMIKSYHKVHEGMRSLLPFSRKTFTMDMKNTNEMWQSMSPEEKEMFNFDMSTLNWKE 438

  Fly   439 IHGLVIQSCSNMLHSIRTHLLRE--DPKTLERSKRILRIKVFLYRLLR--LFLLYKLILWL 495
            ..     :|  ::..||.:|.::  .|.::...||||:....|.|:|:  |..|:...:||
  Fly   439 YF-----TC--LMDGIRLYLFKDLRTPDSVAEGKRILKRFYVLDRILKTVLVTLFGGFIWL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 99/318 (31%)
FAR_C 379..>410 CDD:296071 8/32 (25%)
CG10097NP_001027182.1 PLN02996 1..453 CDD:215538 133/475 (28%)
FAR-N_SDR_e 12..330 CDD:187547 100/334 (30%)
Sterile 363..453 CDD:281068 25/96 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466755
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26995
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
98.850

Return to query results.
Submit another query.