DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FarO and CG5065

DIOPT Version :9

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001163168.1 Gene:CG5065 / 36860 FlyBaseID:FBgn0034145 Length:625 Species:Drosophila melanogaster


Alignment Length:529 Identity:164/529 - (31%)
Similarity:258/529 - (48%) Gaps:76/529 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EFFEDSEIFVTGGSGVVGKALVEKLLRSC-NVRRIYVLLRPRKQLTAEQRLVRLRQATVFHVLAV 74
            :|:....:|:|||:|.:||.||||||||| .:|.||:|:||::......||..|..|.:|..|..
  Fly   121 QFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNAPLFESLRQ 185

  Fly    75 QKPEELDKIVAVPGDVSLPGLGI---DPSMMQRMKGVSLVYHCAATVRFDEPLREAVRLNVGGTL 136
            :||:||.|::.:.||::...|||   |.:::.|  .||:|:|.||||:|||.|:.:|.:|:.||.
  Fly   186 EKPKELSKVIPISGDITSEELGISEKDQNLLCR--NVSVVFHSAATVKFDEKLKLSVTINMLGTK 248

  Fly   137 EALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLCLRMIDDVADDGMLNALTRKLI 201
            ..::....:..|.|.|||||.|.|...|.|....|:.|.:....:.:|:.:.:| :|:.||.:||
  Fly   249 RLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNPDDIISLINWLPED-ILDQLTPRLI 312

  Fly   202 MGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVGAGIL 266
            ...||||||||.|||.::......|||.:.|||||..::.:|..|:..:..|..||.:.:..|:.
  Fly   313 GKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMF 377

  Fly   267 KTVYLGKDIRLDITPQDIGIKSMLCYTKMGYDIYRQGPPADLPVFLSSSCT----------HVPH 321
            :|:...|:...|:.|.||.|..|:...      :|........:.:.:.||          .|.|
  Fly   378 RTMMCEKNYVADMVPVDIVINLMIAAA------WRTATRKSNNLLIYNCCTGQRNPIIWSEFVKH 436

  Fly   322 TFTQIAEQMDTLDLW---RDVAFEKNLMIPGCHYTDKRWAYQFLVFTKQILPALILDLLLRIFGQ 383
            ..|.:.:......||   .|:...:.:....|             ..|..|||.|||.:.||.|:
  Fly   437 AMTSVRKHPLEGCLWYPTGDLRMNRPMNTLNC-------------IAKHFLPAYILDGVARIMGK 488

  Fly   384 KPVLMSAVRKAYQTLEVMQPFMFNNW---DSPGVSDMETLS-KHGEGSAF-----NFDAFNHPDI 439
            ||.:::...|..:.:|.::.|....|   |....:.:.||| |..|...|     |:|.:....:
  Fly   489 KPFVVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYV 553

  Fly   440 HGLVIQSCSNMLHSIRTHLLREDPKTLERS-KRILRIKVFLYRLLRLFLLYKLILW--------- 494
            .|            .|..|.::.|::|..| ||:||: .:|::|.:|..:  |:.|         
  Fly   554 LG------------FREFLFKQRPESLPASRKRMLRL-YYLHQLTKLVAV--LLTWRFLMSRSKR 603

  Fly   495 ---LWRSYL 500
               ||.|:|
  Fly   604 LNDLWSSFL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 115/323 (36%)
FAR_C 379..>410 CDD:296071 9/33 (27%)
CG5065NP_001163168.1 FAR-N_SDR_e 126..445 CDD:187547 115/327 (35%)
Sterile 472..562 CDD:281068 27/101 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466818
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 1 0.900 - - OOG6_100550
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.750

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