DRSC/TRiP Functional Genomics Resources

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Protein Alignment FarO and LOC1278439

DIOPT Version :10

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_318028.5 Gene:LOC1278439 / 1278439 VectorBaseID:AGAMI1_009688 Length:493 Species:Anopheles gambiae


Alignment Length:502 Identity:165/502 - (32%)
Similarity:275/502 - (54%) Gaps:36/502 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FEDSEIFVTGGSGVVGKALVEKLLRSC-NVRRIYVLLRPRKQLTAEQRLVRLRQATVFHVLAVQK 76
            |.::::|:|||:|.:||.|:||||||| .:.|::||:|.::..:.|.||..:....:|.:|..:.
Mosquito    13 FAEADVFITGGTGFMGKVLIEKLLRSCPQIARVFVLMRAKRGKSLEDRLKLITDGVLFDMLKREN 77

  Fly    77 PEELDKIVAVPGDVSLPGLGIDPSMMQRMKGVSLVYHCAATVRFDEPLREAVRLNVGGTLEALKF 141
            ||.|.||..:.||.::..||:.|..|:|||.|..|:|.||:||||:||::|:.:|...|.|.|.:
Mosquito    78 PEVLKKIQPIEGDCTMLKLGMSPDSMERMKDVQFVFHAAASVRFDDPLKDAILINTRSTREVLDW 142

  Fly   142 AETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLCLRMIDDVADDGMLNALTRKLIMGFPN 206
            |:||.:|||.:||||.|.||.|..||.|.|...||||..:|:. ::.|:.:|..:..||....||
Mosquito   143 AKTLRKLRAVVHVSTTYCNPELMHVEEKIYPPKMDWREAIRLA-EMFDNALLETVKEKLTQFAPN 206

  Fly   207 TYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVGAGILKTVYL 271
            |||:||.|||.:..:||:.:|::|:|||||.....:|..|:..:..|.:||.....:|:::|..|
Mosquito   207 TYTYTKALAEQICYEYRNDIPLVVFRPSIVTNTETEPLMGWVDNFNGPIGLLLGCASGVVRTGLL 271

  Fly   272 GKDIRLDITPQDIGIKSMLCYTKMGYDIYRQGPPADLPVFLSSSCTHVPHTFTQIAEQMDTLDLW 336
            ..:.|::..|.|:.||:::...........||   .|||:.|:            ||...|::..
Mosquito   272 DLEKRINCIPVDVSIKAIIVAAWKRATTDEQG---TLPVYNSA------------AEPEKTINYG 321

  Fly   337 R-----DVAFEKN-----LMIPGCHYTDKRWAYQFLVFTKQILPALILDLLLRIFGQKPVLMSAV 391
            .     .|.|::.     |..||...|..::.:..:.|..|:|||:|:|.|||:.|:.|.|:...
Mosquito   322 TMLYDGKVLFDRTPLSNMLWAPGGTTTSNKYCFYLVFFCCQLLPAIIVDTLLRVAGKVPFLLRLN 386

  Fly   392 RKAYQTLEVMQPFMFNNW--DSPGVSDMETLSKHGEGSAFNFDAFNHPDIHGLVIQSCSNMLHSI 454
            ||.:.....::.||.|.|  .:....::|......:...|:.:.|    :.|::....|.:|.. 
Mosquito   387 RKIFDAQVSLRYFMNNEWVFKTENFKELEYTLTADDRKDFSTNYF----VRGMMEYYESAILGG- 446

  Fly   455 RTHLLREDPKTLERS-KRILRIKVFLYRLLRLFLLYKLILWLWRSYL 500
            |.:||:|..:.:..: |:..|::|..| .|:..|.:.::.:::..|:
Mosquito   447 RRYLLKEPDENIAYALKKYKRLRVLNY-TLKFALSFLIVYFIYNKYI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 119/310 (38%)
Sterile 379..>410 CDD:460779 10/32 (31%)
LOC1278439XP_318028.5 None

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