DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FarO and si:dkey-97m3.1

DIOPT Version :9

Sequence 1:NP_652021.1 Gene:FarO / 45707 FlyBaseID:FBgn0023550 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001076558.1 Gene:si:dkey-97m3.1 / 100034578 ZFINID:ZDB-GENE-060503-367 Length:515 Species:Danio rerio


Alignment Length:521 Identity:157/521 - (30%)
Similarity:262/521 - (50%) Gaps:64/521 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GEMEEFFEDSEIFVTGGSGVVGKALVEKLLRSC-NVRRIYVLLRPRKQLTAEQRLVRLRQATVFH 70
            |.:.|::....:.:||.:|.:||.||||||||| :|..:|:|:||:...:..:|:..:.:..:|.
Zfish     2 GSISEWYAGKNVLITGATGFMGKVLVEKLLRSCPDVNALYILVRPKAGQSMSERVQDMMKCKLFD 66

  Fly    71 VLAVQKPEELDKIVAVPGDVSLPGLGIDPSMMQRMKG-VSLVYHCAATVRFDEPLREAVRLNVGG 134
            .:....||...||:|:..::..|||.|....::.:.. |.:|:|||||:||||||:.|::|||..
Zfish    67 RVREDNPEFHQKIIAISSELMQPGLAISAQDVETLTSRVHIVFHCAATIRFDEPLKHALQLNVMA 131

  Fly   135 TLEALKFAETLPQLRAFIHVSTFYSNPYLTRVEPKYYSSPMDWRLCLRMIDDV--ADDGMLNALT 197
            |.:.|..|:.:.||:||||:||.|:|.....::...|..|::.|   ::||.:  .|:.::..:|
Zfish   132 TQQLLSLAQQMQQLQAFIHISTAYANCNRRHIDELIYPPPVEPR---KLIDSLEWMDESIIRDIT 193

  Fly   198 RKLIMGFPNTYTFTKNLAESLVNDYRHRLPVIVYRPSIVLFAVEDPSPGFSPSLMGAMGLFALVG 262
            .:||..:|||||:||.|||.:|.....:|.|.:.|||||..:.::|.||:..:..|..|:|...|
Zfish   194 PRLIGDWPNTYTYTKALAECVVQQESAKLNVGIVRPSIVGASWQEPFPGWIDNFNGPSGVFIAAG 258

  Fly   263 AGILKTVYLGKDIRLDITPQDIGIKSMLC---YTKMGYDIYRQGPPADLPVFLSSSCT------- 317
            .|||:|:....|...|:.|.|:.|...|.   ||.:       ..|....|:   :||       
Zfish   259 KGILRTMRASNDAVADLIPVDVVINLTLAAGWYTAV-------NKPKTALVY---NCTTGGINPF 313

  Fly   318 -------HVPHTFTQ-IAEQMDTLDLWRDVAFEKNLMIPGCHYTDKRWAYQFLVFTKQILPALIL 374
                   ||..||.: ..||          ||.:    |..:.|.....||:.:.....:|||:.
Zfish   314 HWGEIEHHVMSTFKRNPLEQ----------AFRR----PNANITSNYLIYQYWILVSHKVPALLY 364

  Fly   375 DLLLRIFGQKPVLMSAVRKAYQTLEVMQPFMFNNWD--SPGVSDMETLSKHGEGSAFNFDA--FN 435
            |||||:.|.||.:|....:.::.:.:::.|...:|:  |..::.:.......:...||||.  .|
Zfish   365 DLLLRLSGHKPQMMRIFNRLHKAIGLLEYFSSQDWEWNSDNMNMLMAQLSTDDRKIFNFDVRQLN 429

  Fly   436 HPDIHGLVIQSCSNMLHSIRTHLLREDPKTLERSKRILRIKVFLYRLLRLFLLYKLILWLWRSYL 500
            .|:.       ..|.....:.::|.||...:..:::.||    ..|.:|......|::::||.::
Zfish   430 WPEY-------IENYCIGTKKYVLNEDMSDIPAARQHLR----KLRNIRYTFNTVLLVFIWRVFI 483

  Fly   501 A 501
            |
Zfish   484 A 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FarONP_652021.1 FAR-N_SDR_e 18..328 CDD:187547 114/331 (34%)
FAR_C 379..>410 CDD:296071 6/30 (20%)
si:dkey-97m3.1NP_001076558.1 PLN02996 2..446 CDD:215538 146/477 (31%)
FAR-N_SDR_e 11..330 CDD:187547 114/331 (34%)
Sterile 357..447 CDD:281068 22/96 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593287
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100550
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.650

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