DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d14 and Cyp46a1

DIOPT Version :10

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001386630.1 Gene:Cyp46a1 / 362782 RGDID:1306605 Length:500 Species:Rattus norvegicus


Alignment Length:523 Identity:140/523 - (26%)
Similarity:256/523 - (48%) Gaps:65/523 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILLATALAWDYMRKRRHNKMYAEAGIRGP--KSYPLVGNAPLLINESPKSKSSIFDMQFRLIAE 69
            |:|||..|...::.:.|....:    |.||  .|: |:|:.|....:.......:.|:......:
  Rat    11 AVLLAFGLCCTFVHRARSRYEH----IPGPPRPSF-LLGHLPYFWKKDEACGRVLQDVFLDWAKK 70

  Fly    70 FGKNIKTQMLGESGFMTADSKMIEAIMSSQQTIQKNNLYSLLVNWLGDGL----LISQGK--KWF 128
            :|..::..:..::..:....:.::..:.|.:..:.:.:|..:....|:.|    |:|:..  :|:
  Rat    71 YGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRAIQTVFGERLFGQGLVSECDYGRWY 135

  Fly   129 RRRKIITPAFHFKILEDFVEVFDQQSATMVQKLYDRADGKTVINMFPVACLCAMDIIAETAMGVK 193
            ::|:::..||....|...:..|::::..:::.|..:|||:|.::|..:.....:||:|:.|.|::
  Rat   136 KQRRVMDLAFSRSSLVSLMGTFNEKAEQLMEILEAKADGQTPVSMQDMLTCATIDILAKAAFGME 200

  Fly   194 INAQLQPQFTYVQSV------TTASAMLAERFMNPLQRLDFTMKLFYPKLLDKLNDAVKNMHDFT 252
            .:..|..|....|:|      .:||.....:|| |.:|          |.|.::.::::.:....
  Rat   201 TSMLLGAQKPLSQAVKVMLEGISASRNTLAKFM-PGKR----------KQLREIRESIRLLRQVG 254

  Fly   253 NSVITERRELLQKAIADGGDADAALLNDVGQKRRMALLDVLLKSTIDGAPLSNDD--IREEVDTF 315
            ...:..|||.|::    |.|..|.:|..:            ||:. :||   .||  :.:...||
  Rat   255 KDWVQRRREALKR----GEDVPADILTQI------------LKAE-EGA---QDDEVLLDNFVTF 299

  Fly   316 MFEGHDTTTSSIAFTCYLLARHPEVQARVFQEVRDVIGDDKSAPVTMKLLGELKYLECVIKESLR 380
            ...||:|:.:.:|||...|:|.||:.||:..||.:|:|..:.  :..:.||.|:||..|:|||||
  Rat   300 FIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH--LDYEDLGRLQYLSQVLKESLR 362

  Fly   381 LFPSVPIIG--RYISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPEKFIPDRFSMERKGEIS 443
            |:|  |..|  |.:.::|::||..:|.::.::...|...|...||.||..|.||||.   .|...
  Rat   363 LYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFG---PGAPK 422

  Fly   444 P-FAYTPFSAGPRNCIGQKFAMLEMKSTISKMVR--HFELLPLGEEVQPVLNVILRSTTGINCGL 505
            | |.|.|||.|.|:||||:||.:|:|..::|:::  .|.|:| |:.........|:....:.|.|
  Rat   423 PRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVP-GQRFGLQEQATLKPLDPVLCTL 486

  Fly   506 KPR 508
            :||
  Rat   487 RPR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 CYP4 71..503 CDD:410721 122/450 (27%)
Cyp46a1NP_001386630.1 CYP46A1-like 61..484 CDD:410706 123/461 (27%)

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