DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d14 and cyp26b1

DIOPT Version :9

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_997831.1 Gene:cyp26b1 / 324188 ZFINID:ZDB-GENE-030131-2908 Length:511 Species:Danio rerio


Alignment Length:528 Identity:128/528 - (24%)
Similarity:200/528 - (37%) Gaps:139/528 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AILLATA-----LAWDYMRKRRHNKMYAEAGIRGPKSYPLVGNA------PLLINESPKSKSSIF 60
            |:|||.:     |.|...|    :|.......:|...:|::|..      ....:.|.:.|    
Zfish    23 ALLLAVSQQLWQLRWTATR----DKSCKLPMPKGSMGFPIIGETCHWFFQGAGFHASRRQK---- 79

  Fly    61 DMQFRLIAEFGKNIKTQMLGESGFMTADSKMIEAIMSSQQTIQKNNLYSLLVNW-------LG-D 117
                     :|...||.:||........::.:..::..:.::       :.|:|       || :
Zfish    80 ---------YGNVFKTHLLGRPLIRVTGAENVRKVLMGEHSL-------VTVDWPQSTSTLLGPN 128

  Fly   118 GLLISQGKKWFRRRKIITPAFHFKILEDFVEVFDQQSATMVQKLYDRADGKTVINMFPVACLCAM 182
            .|..|.|....:||||....|..:.||.::....|                              
Zfish   129 SLANSIGDIHRKRRKIFAKVFSHEALESYLPKIQQ------------------------------ 163

  Fly   183 DIIAETAMGVKINAQLQPQFTYVQSVTTASAMLAERFMNPLQRLDFTMKLFYPKLLDKLNDAVKN 247
             :|.||......|.  .|...|.:|                |||.|.|.:   ::|.......:.
Zfish   164 -VIQETLRVWSSNP--DPINVYRES----------------QRLSFNMAV---RVLLGFRIPEEE 206

  Fly   248 MH-------DFTNSVIT--------------ERRELLQKAIADGGDADAAL----LNDVGQKRRM 287
            ||       :|..:|.:              ..|:.|||:|      :.|:    |:..|:....
Zfish   207 MHCLFSTFQEFVENVFSLPIDLPFSGYRKGIRARDSLQKSI------EKAIREKPLHTQGKDYTD 265

  Fly   288 ALLDVLLKSTID-GAPLSNDDIREEVDTFMFEGHDTTTSSIAFTCYLLARHPEVQARVFQEVRD- 350
            | |||||:|..: ...|:..:::|.....:|....||.|:.......|.|||.|..::.:|:|. 
Zfish   266 A-LDVLLESAKENNTELTMQELKESTIELIFAAFATTASASTSLVMQLLRHPAVLEKLREELRSC 329

  Fly   351 -VIGDDKSAPVTMKL--LGELKYLECVIKESLRLFPSVPIIGRY--ISQDTVLDGKLIPADSNVI 410
             ::.|.......::|  :..||||:|||||.||||  .|:.|.|  .:|...|||..:|...:|:
Zfish   330 GLLHDGCLCQGELRLDSIISLKYLDCVIKEVLRLF--APVSGGYRIATQTFELDGVQVPKGWSVM 392

  Fly   411 ILIYHAQRDPDYFPDPEKFIPDRFSMER-KGEISPFAYTPFSAGPRNCIGQKFAMLEMKSTISKM 474
            ..|.........|.|.|.|.|||||.|| :.....|.|.||..|.|:|:|::.|.|.:|....::
Zfish   393 YSIRDTHDTSAVFKDVEAFDPDRFSPERSEDREGRFHYLPFGGGVRSCLGKQLATLFLKLLAVEL 457

  Fly   475 V--RHFEL 480
            .  ..|||
Zfish   458 AGGSRFEL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 p450 34..489 CDD:278495 120/496 (24%)
cyp26b1NP_997831.1 p450 1..489 CDD:299894 128/528 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.