DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d14 and Cyp26b1

DIOPT Version :9

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_851601.2 Gene:Cyp26b1 / 312495 RGDID:631379 Length:512 Species:Rattus norvegicus


Alignment Length:520 Identity:114/520 - (21%)
Similarity:191/520 - (36%) Gaps:150/520 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RGPKSYPLVGNAPLLINESPKSKSSIFDMQFRLIAEFGKNIKTQMLGESGFMTADSKMIEAIM-- 96
            :|...:||:|.....:.:....:||..:       ::|...||.:||........::.:..|:  
  Rat    51 KGSMGFPLIGETGHWLLQGSGFQSSRRE-------KYGNVFKTHLLGRPLIRVTGAENVRKILLG 108

  Fly    97 -----------SSQQTIQKNNLYSLLVNWLGDGLLISQGKKWFRRRKIITPAFHFKILEDFVEVF 150
                       |::..:..|.    :.|.:||   |.:.|     ||:.:..|..:.||.::   
  Rat   109 EHQLVSTEWPRSARVLLGPNT----VANSIGD---IHRNK-----RKVFSKIFSHEALESYL--- 158

  Fly   151 DQQSATMVQKLYDRADGKTVINMFPVACLCAMDIIAETAMGVKINAQLQPQFTYVQSVTTASAML 215
                                    |...|...|.:...:.        ||:              
  Rat   159 ------------------------PKIQLVIQDTLRAWSS--------QPE-------------- 177

  Fly   216 AERFMNPLQRLDFTMKLFYPKLL-------DKLNDAVKNMHDFTNSVIT--------------ER 259
            |.......|||.|.|.:   ::|       :.|.:..:....|..:|.:              :.
  Rat   178 AINVYQEAQRLTFRMAV---RVLLGFSIPEEDLGNLFEVYQQFVENVFSLPVDLPFSGYRRGIQA 239

  Fly   260 RELLQKAI----------ADGGD-ADAALLNDVGQKRRMALLDVLLKSTID-GAPLSNDDIREEV 312
            |::|||.:          ..|.| :||              ||:|::|:.: |..::..::::..
  Rat   240 RQILQKGLEKAIREKLQCTQGKDYSDA--------------LDILIESSKEHGKEMTMQELKDGT 290

  Fly   313 DTFMFEGHDTTTSSIAFTCYLLARHPEVQARVFQEVRD---VIGDDKSAPVTMKL--LGELKYLE 372
            ...:|..:.||.|:.......|.:||.|..::.:|:|.   :.|.......|::|  |..|:||:
  Rat   291 LELIFAAYATTASASTSLIMQLLKHPAVLEKLREELRAQGLLHGGGCPCEGTLRLDMLSGLRYLD 355

  Fly   373 CVIKESLRLFPSVPIIGRY--ISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPEKFIPDRFS 435
            |||||.:|||  .|:.|.|  :.|...|||..||...:|:..|.........|.|...|.|||||
  Rat   356 CVIKEVMRLF--TPVSGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFS 418

  Fly   436 MER-KGEISPFAYTPFSAGPRNCIGQKFAMLEMK---------STISKMVRHFELLPLGEEVQPV 490
            ..| :.:...|.|.||..|.|.|:|:..|.|.:|         |......|.|..:.|...:.||
  Rat   419 QARSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRFELATRTFPRITLVPVLHPV 483

  Fly   491  490
              Rat   484  483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 p450 34..489 CDD:278495 112/517 (22%)
Cyp26b1NP_851601.2 CYP26B1 60..490 CDD:410730 111/511 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.