DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d14 and Cyp26c1

DIOPT Version :9

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_217935.3 Gene:Cyp26c1 / 308190 RGDID:1308843 Length:518 Species:Rattus norvegicus


Alignment Length:520 Identity:123/520 - (23%)
Similarity:210/520 - (40%) Gaps:126/520 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RGPKSYPLVGNAPLLINESPKSKSSIFDMQFRLIAEFGKNIKTQMLGESGFMTADSKMIEAIMSS 98
            :|...:|..|.....:.:..:..||..:       .:|...||.:||......:.::.:..|:..
  Rat    51 KGSMGWPFFGETLHWLVQGSRFHSSRRE-------RYGTVFKTHLLGRPVIRVSGAENVRTILLG 108

  Fly    99 QQTIQKNNLYSLLVNW-------LGDGLLI-SQGKKWFRRRKIITPAFHFKILEDFV-------- 147
            :..:.::       .|       ||...|: :.|::..:|||::...|....||.||        
  Rat   109 EHRLVRS-------QWPQSAHILLGSHTLLGAVGERHRQRRKVLARVFSRPALEQFVPRLQEALR 166

  Fly   148 -EVFDQQSATMVQKLYDRADGKTVINMFPVACLCAMDIIAETAMGVKINAQLQPQFTYVQSVTTA 211
             ||....:|.....:|..|...|    |.:|        |...:|::::          ::..|.
  Rat   167 REVRSWCAAQRPVAVYQAAKALT----FRMA--------ARILLGLQLD----------EARCTE 209

  Fly   212 SAMLAERFMNPLQRLDFTMKLFYPKLLDKLNDAVK---NMHDFTNSVITERRELLQKAIADGGDA 273
            .|...||.:..|    |::.|..|  ...|...::   .::...:.||.|:  |.::..|:.|||
  Rat   210 LAQTFERLVENL----FSLPLDVP--FSGLRKGIRARDQLYQHLDEVIAEK--LREELTAEPGDA 266

  Fly   274 DAALLNDVGQKRRMALLDVLLKSTIDGAPLSNDDIREEVDTFMFEGHDTTTSSIAFTCYLLARHP 338
            ...::|...:.               |..||..:::|.....:|....||.|:......||.:||
  Rat   267 LHLIINSAREL---------------GRELSVQELKELAVELLFAAFFTTASASTSLILLLLQHP 316

  Fly   339 EVQARVFQEV-RDVIGDDKS-AP--------------VTMKLLGELKYLECVIKESLRLFPSVPI 387
            ...|::.||: ...:|...| ||              :::.:||.|:|::||:||.|||.|  |:
  Rat   317 AAIAKIQQELSAQGLGSPCSCAPRASGSRPDCSCEPDLSLAVLGRLRYVDCVVKEVLRLLP--PV 379

  Fly   388 IGRYIS--QDTVLDGKLIPADSNVIILIYHAQRDPD-----YFPDPEKFIPDRFSME---RKGEI 442
            .|.|.:  :...|||..||...:|:..|    ||..     |...||.|.|:||.:|   .:|..
  Rat   380 SGGYRTALRTFELDGYQIPKGWSVMYSI----RDTHETAAVYRSPPEGFDPERFGVESEDARGSG 440

  Fly   443 SPFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVR--HFEL----------LPLGEEVQPVLNVIL 495
            ..|.|.||..|.|:|:||:.|...::....::||  .:||          :|:   |.||..::|
  Rat   441 GRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELATPAFPVMQTVPI---VHPVDGLLL 502

  Fly   496  495
              Rat   503  502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 p450 34..489 CDD:278495 120/512 (23%)
Cyp26c1XP_217935.3 p450 40..500 CDD:299894 122/516 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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