DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d14 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:523 Identity:129/523 - (24%)
Similarity:214/523 - (40%) Gaps:83/523 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLATALAWDYMRKRRHNKMYAEAGIRGPKSYPLVGNAPLLINESPKSKSSIFDMQFRLIAEFGK 72
            :.||....||.......::..|.....|...:|..|....::.:..|    ...|:.|   ::|.
  Rat    20 LFLAALKLWDLYCVSSRDRSCALPLPPGTMGFPFFGETLQMVLQRRK----FLQMKRR---KYGF 77

  Fly    73 NIKTQMLGESGFMTADSKMIEAIMSSQQTIQKNNLYSLLVNW-------LGDGLLIS-QGKKWFR 129
            ..||.:.|........:..:..|:..:..:       :.|:|       ||.|.|.: ......:
  Rat    78 IYKTHLFGRPTVRVMGADNVRRILLGEHRL-------VSVHWPASVRTILGAGCLSNLHDSSHKQ 135

  Fly   130 RRKIITPAFHFKILEDFVEVF-DQQSATMVQKLYDRADGKTVINMFP----VACLCAMDIIAETA 189
            |:|:|..||:.:.|:.:|.|. ::.|..:.|.|   :.|:..:.::|    :....||.|:....
  Rat   136 RKKVIMQAFNREALQCYVPVIAEEVSGCLEQWL---SCGERGLLVYPEVKRLMFRIAMRILLGCE 197

  Fly   190 MGVKINAQLQPQFTYVQSVTTASAMLAERFMNPLQRLDFTMKLFYPKLLDKLNDAVKN---MHDF 251
            .|.....:.:.|             |.|.|....:.| |::.:..|  ...|...||.   :|..
  Rat   198 PGPAGGGEDEQQ-------------LVEAFEEMTRNL-FSLPIDVP--FSGLYRGVKARNLIHAR 246

  Fly   252 TNSVITERRELLQKAIADGGDADAALLNDVGQKRRMALLDVLLKSTID-GAPLSNDDIREEVDTF 315
            ....|..:...||.|..|.|..||              |.:|::.:.: |..|....:::.....
  Rat   247 IEENIRAKIRRLQAAEPDAGCKDA--------------LQLLIEHSWERGERLDMQALKQSSTEL 297

  Fly   316 MFEGHDTTTSSIAFTCYLLARHPEVQARVFQEVRDVIG-------DDKSAPVTMKLLGELKYLEC 373
            :|.||:||.|:.......|..:|.|..:|.:|::.. |       :||   :.|:.|.:|||:.|
  Rat   298 LFGGHETTASAATSLITYLGLYPHVLQKVREEIKSK-GLLCKSHHEDK---LDMETLEQLKYIGC 358

  Fly   374 VIKESLRLFPSVPIIGRYISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPEKFIPDRFSMER 438
            ||||:|||.|.||...|...:...|:|..||...|||..|.......|.|.:.|:|.||||:...
  Rat   359 VIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADSFTNKEEFNPDRFTSLH 423

  Fly   439 KGEISPFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVRH--FELL------PLGEEVQPVLNVIL 495
            ..:.|.|::.||..|.|:|:|::||.:.:|....::.|.  ::||      .....|.||.|:..
  Rat   424 PEDTSRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARRCDWQLLNGPPTMKTSPPVYPVDNLPA 488

  Fly   496 RST 498
            |.|
  Rat   489 RFT 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 p450 34..489 CDD:278495 119/486 (24%)
Cyp26a1NP_569092.2 p450 43..491 CDD:299894 123/498 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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