DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d14 and cyp26c1

DIOPT Version :9

Sequence 1:NP_001259179.1 Gene:Cyp4d14 / 45706 FlyBaseID:FBgn0023541 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:594 Identity:130/594 - (21%)
Similarity:206/594 - (34%) Gaps:177/594 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LELFAILLAT----ALAWDYMRKRRHNKMYAEAGIRGPKSYPLVGNAPLLINESPKSKSSIFDMQ 63
            |.|..:|.|:    :|.|...|.|..:....    :|...:|..|.....:.:.....||..:  
 Frog    20 LSLVLLLAASHQLWSLRWHSTRDRGSSLPLP----KGSMGWPFFGETLHWLVQGSSFHSSRRE-- 78

  Fly    64 FRLIAEFGKNIKTQMLGESGFMTADSKMIEAIMSSQQTIQKNNLYSLLVNW-------LGDGLLI 121
                 ::|...||.:||:.......::.|..|:     :.:::|.|  ..|       ||...|.
 Frog    79 -----KYGNIFKTHLLGKPVIRVTGAENIRKIL-----LGEHHLVS--TQWPQSTQIILGSNTLS 131

  Fly   122 -SQGKKWFRRRKIITPAFHFKILEDFVEVFDQQSATMVQKLYDRADGKTVINMFPVACL-CAMDI 184
             |.|:...::||:::.......||.::....:.....|:. :.|..|       ||:.| ||..:
 Frog   132 NSIGELHRQKRKMMSKVLSSAALESYLPRIHEAVRWEVRS-WCRGVG-------PVSMLSCAKAL 188

  Fly   185 IAETAMGVKINAQLQPQFTYVQSVTTASAMLAERFMNPLQRLDFTMKLFYP-KLLDKLNDAVKNM 248
            ....|..:.:...|..  |..|.:|.....|.|..        |.:.|..| ..|.|...|...:
 Frog   189 TFRIAARILLGLSLTD--TQFQELTRTFEQLVENL--------FCLPLDIPFSGLRKGMKARDTL 243

  Fly   249 HDFTNSVITERRELLQKAIADGGDADAALLNDVGQKRRMALLDVLLKSTIDGA-PLSNDDIREEV 312
            |.:....|.|:   |.|.     |.||.  .|.        ||.|:.|..:|. .::..:::|..
 Frog   244 HQYMEEAIKEK---LSKR-----DPDAC--EDA--------LDYLINSAKEGGKEINMQELKESA 290

  Fly   313 DTFMFEGHDTTTSSIAFTCYLLARHPEVQARVFQEV--------------------RDVIGD--- 354
            ...:|....||.|:......||.:||....::.||:                    .:::.|   
 Frog   291 IELIFAAFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEHCEQCLPATENPNNNILQDNGH 355

  Fly   355 -------------------------------------------------------------DKS- 357
                                                                         ||| 
 Frog   356 QCLTAGCQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSSKNLVNGENRIQEAPCSHDKSN 420

  Fly   358 -APVTMKL-----------------LGELKYLECVIKESLRLFPSVPIIGRYIS--QDTVLDGKL 402
             :||..||                 |..|.||:||:||.|||.|  |:.|.|.:  |...|||..
 Frog   421 CSPVPGKLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLP--PVSGGYRTALQTFELDGYQ 483

  Fly   403 IPADSNVIILIYHAQRDPDYFPDPEKFIPDRFSMER-KGEISPFAYTPFSAGPRNCIGQKFAMLE 466
            ||...:|:..|.........:.:.|.|.|:|||.|| :|::..|.|.||..|.|:|||::.|.:.
 Frog   484 IPKGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEGKLGRFNYIPFGGGARSCIGKELAQII 548

  Fly   467 MKSTISKMV 475
            :|....::|
 Frog   549 LKILAMELV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d14NP_001259179.1 p450 34..489 CDD:278495 122/559 (22%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:425388 120/551 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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