DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment milt and trak2

DIOPT Version :10

Sequence 1:NP_001245927.1 Gene:milt / 45683 FlyBaseID:FBgn0262872 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_689302.6 Gene:trak2 / 560810 ZFINID:ZDB-GENE-030131-7496 Length:993 Species:Danio rerio


Alignment Length:1047 Identity:278/1047 - (26%)
Similarity:410/1047 - (39%) Gaps:306/1047 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 PSPITGALEAPHFELPQELLQAASSWEVMYYASKNVDGKNCLKVVRSLLTNKVLCGNRVSQMTRA 281
            ||.|:..|....|.. ...|...||:.        .:|.|.|        :|||..:||.|||:.
Zfish    56 PSAISPMLAEETFRY-MTFLAVGSSFP--------QNGSNSL--------SKVLSADRVEQMTKT 103

  Fly   282 YDDIEAVTRLLEEKEKDLELTVQIGKELLTQNNALEARVADLETDLKASNDDRAQLVHELHKKNE 346
            |:||:.||.||.|:::||||..:||:.||.:|:.|:.|...||..|..:.|...||.|||.||:|
Zfish   104 YNDIDVVTHLLSERDRDLELAARIGQSLLQRNHVLQERNESLEEQLAQALDQVHQLQHELAKKDE 168

  Fly   347 LISVLTNDADDGTDTD----TP-----------TMSKSITLDLLQRKVNSLLDENKSLKCEATQL 396
            |:.::.: |.:.::||    ||           .:|:   |:.||.|:..|.:||.:|:.||..|
Zfish   169 LLRMVAS-ASEESETDSSCSTPLRHPVPAGAALALSQ---LEALQSKLQDLEEENLTLRSEACHL 229

  Fly   397 AHQTDEVEEHERQLMADISAQLNDANSQYDNLSLELERQREENRLQHEQIVNLTARLAEAEMRLH 461
            ..:|...||.|:||:.|...:|.::|||..:|:.||.::.|:.....|:|..|.:::.|.:.|:.
Zfish   230 KKETITYEEKEQQLVNDCVKELRESNSQMVSLTDELSQKNEDLMRHQEEIAQLLSQIVELQHRVK 294

  Fly   462 QLTQDNDEHLSLLHVTKENQNALALELVEFKQRYEEVLALLHSAQDQLKQQRKRSQPQA---RSS 523
            :|..:.:|....|..:||.|..|..||.|...|..|.:.:||.:|:::|..|.::.|.|   |.:
Zfish   295 ELALEKEELRIHLQASKEAQRQLTNELKELSDRNAECVGMLHESQEEIKDLRSKNTPSAGLRRHT 359

  Fly   524 FLGGLGTSGAGMGGSLFPPDSLHCELMESSLYSENSLDSGISGDSQRSADRISRMMMHMPSGGMS 588
            ..|            |:|.|||..|: |.::..|.|::..|:.:.|||..               
Zfish   360 SYG------------LYPMDSLAAEI-EGTMRREMSVEEEIAFEDQRSFQ--------------- 396

  Fly   589 SSTMGGSVYAGAGNVPPYKRVFDTVRCAGKS-------GNYMDSGNVSMTQLGAMSMSSSSGPRM 646
                              ||||.|||...:|       |..:....|.||.:...|.:.::....
Zfish   397 ------------------KRVFQTVRSVNQSVMRAAAAGPPIPGSGVIMTPVPYQSHTHNTADED 443

  Fly   647 ASMAYPAGSYYRGGSNQSLGVKTLSSESLNSQSDDGYPAQPSGVPGAPGAKELEAALKRLTPAEV 711
            ||         ||..|..|                       |.||:||...|.:||.||:    
Zfish   444 AS---------RGRENSRL-----------------------GQPGSPGGSALTSALNRLS---- 472

  Fly   712 LARRAMLS-----YAPAGTYNYDEPMGHGTGNVRNSDLPLGVRTPDSIMSTGSSGMSGSTNHMSA 771
            |.|:..|.     .|.......|.......|.......|:|        ||.||..:.|...:|:
Zfish   473 LRRQNFLCERQFFQAERERKLQDLTAAESEGGASGCSSPMG--------STVSSFTNLSEFSISS 529

  Fly   772 SMTHQWRLPEKLQIIKPMEGSQTLHHWSRLATPTLSGLLDERPGVTIRGGRGLDDLGMQIYTLSD 836
            |....: |||||||:||||||.|||||.:||.|.|:.:||..|||..:|.|.|..  ..:|.|:|
Zfish   530 SCFKTF-LPEKLQIVKPMEGSLTLHHWQQLAKPHLATILDPHPGVVTKGFRPLPQ--DSVYHLTD 591

  Fly   837 VEED------------------------------------------------------------- 840
            :|||                                                             
Zfish   592 LEEDEDQEKLSWEQKRKLEEPLETKTKEEDEEEEGITFHVRSSSTPEEKRPVRSPANVPPLPASL 656

  Fly   841 --------------------------VSDDL----------------------PGKQFEAPGCTF 857
                                      ||..|                      |||...:...|:
Zfish   657 RNSPVHIATAVSLATAVNQSSSCAAAVSSRLSTSEAPQLHLNLSAKVPSTGMNPGKYQSSTFSTY 721

  Fly   858 TYTNSMVMHPDDGF-VNDLSFLSQSQMSSRMASTSTSRQPSCPATPRAGLSRKNSCSTFSVNL-- 919
            |:|...::||.|.. |...|..|.|......:|..|.  ||.|.||    .|.:...:|.:..  
Zfish   722 TFTTCRILHPSDSTQVTPSSVCSPSVSDYTPSSLRTG--PSTPVTP----CRLSLGDSFPIRRPA 780

  Fly   920 ----GLAGMLNERGIKAVTP----------SALNTPAGPNFSPTVTPCNSPEGSPPRAQSPEPLF 970
                |||.:|.|:||.|..|          |....|:.|..||:.:||.||....||:.|.:.. 
Zfish   781 APPGGLAKLLLEKGISAQGPAPAAAPKKPLSLRLLPSTPPNSPSHSPCPSPVPFDPRSTSSDNF- 844

  Fly   971 GLLSCGADLIRRKIVGDQHQQQQQKQRSSLSKQQQQKIMLSHLERRALRSLNLIEKVESIGLENI 1035
             |.|..|:|..:.:.|  .:..:..:...||.|.|.....||       |:||:|.:..:||:..
Zfish   845 -LASRPAELFLQDVYG--LKLGRAPRPDLLSPQNQSTKAESH-------SVNLVEHLRKLGLDKK 899

  Fly  1036 ISAQRGLGSGIANRSSSPLSSGSLQSLHTSSNSIVDDIHFDRAQIKGVLHRGLKSPTPATASTSA 1100
            :........|.|..|::.|::|        ..|::|.           |.|....|......:::
Zfish   900 VLQGSETNDGHAQESATFLATG--------GGSLLDG-----------LRRNQSLPVMVGRRSAS 945

  Fly  1101 AAAASGP 1107
            |::.|.|
Zfish   946 ASSPSCP 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miltNP_001245927.1 HAP1_N 261..515 CDD:461455 94/268 (35%)
Milton 614..792 CDD:463588 49/189 (26%)
trak2XP_689302.6 None

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