DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment milt and trak1b

DIOPT Version :10

Sequence 1:NP_001245927.1 Gene:milt / 45683 FlyBaseID:FBgn0262872 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_073788072.1 Gene:trak1b / 100537238 ZFINID:ZDB-GENE-150910-1 Length:981 Species:Danio rerio


Alignment Length:1041 Identity:283/1041 - (27%)
Similarity:430/1041 - (41%) Gaps:256/1041 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 MKSGPKSMDPPLGVSAPHLALLHDFAS-KGQRKVEASVPGTPVPS-PITGALEAPHFELPQELLQ 237
            ::|||:......|:..|.....|.... :..:.:......|.:|. .|...||.   :||...|:
Zfish    71 LQSGPEEQYVDQGIEEPPAPHTHSHTRYRDAQTITDVCNSTELPEVEIISLLEE---QLPVYRLR 132

  Fly   238 A-------ASSW--EVMYYASKNVDGKNCLKVVRSLLTNKVLCGNRVSQMTRAYDDIEAVTRLLE 293
            |       ...|  ..:..|..:.|  ...:.::..|:..:||..||.|||:.|:||:|||||||
Zfish   133 ADCVFGYEHDDWIHTPLLPADTHTD--LTTEQIQETLSYFLLCAERVGQMTKTYNDIDAVTRLLE 195

  Fly   294 EKEKDLELTVQIGKELLTQNNALEARVADLETDLKASNDDRAQLVHELHKKNELISVLTNDADDG 358
            |||:||||..:||:.||.:::.|..:...||..|.:..::.|||.|||:.|:||:...|:.|::.
Zfish   196 EKERDLELAARIGQSLLKKSSVLSEQKDFLEEQLCSIREEVAQLHHELNLKDELLQFYTSAAEET 260

  Fly   359 TDTDTPT--MSKSI------TLDLLQRKVNSLLDENKSLKCEATQLAHQTDEVEEHERQLMADIS 415
            .|..:|.  ..:|:      :||:||:|:..|.:||.:|:.||:.|..:|:..||.|:||:.|..
Zfish   261 EDAPSPVAQQGRSVSAHSGSSLDVLQQKLRDLEEENLTLRSEASHLRSETECYEEKEQQLVNDCV 325

  Fly   416 AQLNDANSQYDNLSLELERQREENRLQHEQIVNLTARLAEAEMRLHQLTQDNDEHLSLLHVTKEN 480
            .:|..::.|..:::.||.|:.|:...|.|:|.:|.:.:.:.:.:......:|:|....|...|:.
Zfish   326 RELRQSSLQMSSIADELARKTEDASRQQEEITHLLSLIVDLQKKAKTFAVENEELSQHLSAAKDA 390

  Fly   481 QNALALELVEFKQRYEEVLALLHSAQDQLKQQRKRSQPQARSSFLGGLGTSGAGMGGSLFPPDSL 545
            |..|..||.|.:::|.|.:.:||.||::||..|.||.|.........||         |.|.|||
Zfish   391 QRQLTAELQELQEKYSECVEILHEAQEELKNLRNRSAPAGTPRRYHQLG---------LCPMDSL 446

  Fly   546 HCELMESSLYSENSLDSGISGDSQRSADRISRMMMHMPSGGMSSSTMGGSVYAGAGNVPPYKRVF 610
            ..|: |.::..|.||:   :.|.:....|                               :||||
Zfish   447 AAEI-EGTMRKELSLE---NPDDEEQRVR-------------------------------HKRVF 476

  Fly   611 DTVRCAGKSGNYMDSGNVSMTQLGAMSMSSSSGPRMASMAYPAGSYYRGGSNQSLGVKTLSSESL 675
            :||:...:||....|         |.|.|:..|   ::...|:.......|:.:|..:|   :||
Zfish   477 ETVKSINQSGRRSSS---------ADSPSNIPG---SNQTLPSPGSAHSDSSAALDNRT---QSL 526

  Fly   676 NSQSDDGY-PAQPSGVPGAPGAKELEAALKRLTPAEVLARRAMLSYAPAGTYNYDEPMGHGTGNV 739
            ..:||..: |....    ..|::||:.||:||:    |.|:..||     ...|.|...... |:
Zfish   527 MQESDCAHTPVSEK----RSGSEELQRALRRLS----LRRQNCLS-----ERIYFERRRESL-NL 577

  Fly   740 RNSDLPLGVRTPDSIMSTGSSGMSGSTNHMSASMTHQWRLPEKLQIIKPMEGSQTLHHWSRLATP 804
            .:|.|..     |||||               ..|.:..||.||||:||:|||.||.||.:||.|
Zfish   578 TDSLLHC-----DSIMS---------------CWTSRPYLPNKLQIVKPLEGSATLQHWQQLAQP 622

  Fly   805 TLSGLLDERPGVTIRGGRGLDDLGMQIYTLSDVEEDVSDD------------------------- 844
            .|.|:||.||||..:|.|.|:....|:|...:.|||...:                         
Zfish   623 NLGGILDARPGVLPKGFRPLELELEQVYPYPEYEEDEPGEQYFQNLPTTTAAANHSAAPVHSHAP 687

  Fly   845 --------------------LPGKQFEAPGCTFTYTNSMVMHPDDGFVNDLSFLS--QSQMSSRM 887
                                .|||.......|:|:|...::||.|........|:  .|.:|..|
Zfish   688 SASPSPCLSSGHASIEFSMYFPGKCMAHTSSTYTFTTCKILHPSDELTRVTPSLNAVSSSVSCVM 752

  Fly   888 ASTSTSRQPSCPATP-RAGLSR-------KNSCSTFSVNLGLAGMLNERGIKAVTPSALNTPAGP 944
            :|:..|...:.|.|| |..||:       ::|..|||.:|||..:|.||||.|......:.|.|.
Zfish   753 SSSLRSTPAATPCTPRRMSLSQSQSFTNLRDSTKTFSTSLGLVRLLQERGISAAVYQPQSGPRGA 817

  Fly   945 N---FSPTVTPCNSPEGSPPRAQSP--EPLFGLLSCGADLIRRKIVGDQHQQQQQKQRSSLSKQQ 1004
            .   ||..|.|  :|...|.|..:|  .|..|             .|..|.|    |..|.....
Zfish   818 GGVLFSTCVPP--APPADPQRPSTPPNSPTRG-------------PGPPHTQ----QLFSFKSPT 863

  Fly  1005 QQKIMLSHLERRALR-------------------SLNLIEKVESIGLEN--------IISAQRGL 1042
            .:..:.|...|..|:                   ||||::|::.:||.:        .:.|..||
Zfish   864 HENFLASRPARSLLQEVSGAPARDCESQTDVSMYSLNLVDKLKRLGLASPGAAGPPGPLLAPLGL 928

  Fly  1043 GSGIANRSSSPLSSGSLQSLHTSSNSIVDDIHFDRAQIKGVLHRGLKSPTPATASTSAAAAASGP 1107
                 .|::||.|.                           |:.|::......|...|:.|..||
Zfish   929 -----RRAASPFSP---------------------------LNEGMRRNRSYPAMVGASMAMKGP 961

  Fly  1108 G 1108
            |
Zfish   962 G 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miltNP_001245927.1 HAP1_N 261..515 CDD:461455 94/261 (36%)
Milton 614..792 CDD:463588 47/178 (26%)
trak1bXP_073788072.1 None

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