DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment milt and trak1

DIOPT Version :10

Sequence 1:NP_001245927.1 Gene:milt / 45683 FlyBaseID:FBgn0262872 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_017950014.1 Gene:trak1 / 100135152 XenbaseID:XB-GENE-5992917 Length:960 Species:Xenopus tropicalis


Alignment Length:1068 Identity:291/1068 - (27%)
Similarity:439/1068 - (41%) Gaps:278/1068 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 EAPHFELPQELLQA--ASSWEVMYYASKNVDGKNCLKVVRSLLTNKVLCGNRVSQMTRAYDDIEA 287
            :.||::|..:.:..  ...|......|.:.:.....:.:...|...:||..||.|||:.|:||:|
 Frog    21 QLPHYKLRADTIYGYDHDDWLQTPLISPDANIDLTTEQIEETLKYFLLCAERVGQMTKTYNDIDA 85

  Fly   288 VTRLLEEKEKDLELTVQIGKELLTQNNALEARVADLETDLKASNDDRAQLVHELHKKNELISVLT 352
            |||||||||:||||..:||:.||.:|.||..|...||..::...::.:||.|||..|:||:...|
 Frog    86 VTRLLEEKERDLELAARIGQSLLKKNKALTERNEYLEEQVEHIKEEVSQLRHELSMKDELLQFYT 150

  Fly   353 NDADDG---TDTDTP--------TMSKSITLDLLQRKVNSLLDENKSLKCEATQLAHQTDEVEEH 406
            :.|::.   :...||        ::......|.||:|:..|.|||..|:.||..|..:|...||.
 Frog   151 SAAEESEPESICSTPLKRNESASSVQNYFHFDSLQKKLKDLEDENIVLRSEACHLKTETITYEEK 215

  Fly   407 ERQLMADISAQLNDANSQYDNLSLELERQREENRLQHEQIVNLTARLAEAEMRLHQLTQDNDEHL 471
            |:||:.|...:|.|||.|..::|.||.::.::...|.|:|.:|.:::.:.:.:......:|:|.:
 Frog   216 EQQLVNDCVKELRDANVQIVSISEELAKKTDDAARQQEEITHLLSQIVDIQKKAKAYAVENEELV 280

  Fly   472 SLLHVTKENQNALALELVEFKQRYEEVLALLHSAQDQLKQQRKRSQPQARSSFLGGLGTSGAGMG 536
            ..|...|:.|..|..||.|.:.:|.|.:.:||.||::||..|.::.|...|.....||       
 Frog   281 QHLGAAKDAQRQLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNVISRRYHTLG------- 338

  Fly   537 GSLFPPDSLHCELMESSLYSENSLDSGISGDSQRSADRISRMMMHMPSGGMSSSTMGGSVYAGAG 601
              :||.|||..|: |.|:..|..:|.                        ..|..|.|:      
 Frog   339 --VFPLDSLAAEI-EGSMRKELQMDE------------------------PDSPEMNGN------ 370

  Fly   602 NVPPYKRVFDTVRCAGKSGNYMDSGNVSMTQLGAMSMSSSSGPRMASMAYPAGSYYRGG-SNQSL 665
               .:||||:||:...:...........|...|:...|:.:....:.::.|..|.|.|. ||..:
 Frog   371 ---HHKRVFETVKNVNQVVKQRSLAPSPMNIPGSNQSSAMNSLMSSCVSTPRSSLYGGDVSNIVI 432

  Fly   666 GVKT----LSSESLNSQSDDGYPAQPSGVPGAPGAKELEAALKRLTPAE---VLAR--------R 715
            ..||    |.:||..:...:|...:..|.||.||:.:||.||:||:...   :|.|        |
 Frog   433 DNKTNSIILETESSENSLSNGDKNKKPGTPGTPGSSDLETALRRLSLRRENYILERKFFEDDQER 497

  Fly   716 AMLSYAPAGTYNYDEPMGHGTGNVRNSDLPLGVRTP-DSIMS----------TGSSGMSGSTNHM 769
            .:.|.|..|..:        :|:|          || |||||          ||.||||.|:...
 Frog   498 KLRSLAEKGEIH--------SGSV----------TPTDSIMSLGTHSRLSEFTGVSGMSYSSRSY 544

  Fly   770 SASMTHQWRLPEKLQIIKPMEGSQTLHHWSRLATPTLSGLLDERPGVTIRGGRGLDDLGMQIYTL 834
                     |||||||:||:|||.|||||.:||.|.|.|:||.||||..:|.|.||.....:|..
 Frog   545 ---------LPEKLQIVKPLEGSATLHHWQQLAQPNLGGILDPRPGVVTKGFRTLDLDQEDVYCF 600

  Fly   835 SDVEEDVSDDLPGKQFEA----------------------------------------------- 852
            :|.|||.:.|:|.|.|..                                               
 Frog   601 TDYEEDETGDIPFKSFTTSPSIQHSETSGERSQAQVTVSDSKNCPSHSQAAPEDLQEPATDDDEG 665

  Fly   853 ----PG-C------TFTYTNSMVMHPDDGFVNDLSFLSQ---------SQMSSRMASTSTSRQPS 897
                || |      |||:|...::||.|........|:.         :.:.|..|||       
 Frog   666 SVYYPGKCMSQTNSTFTFTTCRILHPSDELTRVTPSLNAVPTPACGNLNNLKSTPAST------- 723

  Fly   898 CPATPR------AGLSRKNSCSTFSVNLGLAGMLNERGIKAVT-------------------PSA 937
             |.|||      :..:.:.|.:|.|.:|||..:|.||||.|..                   |..
 Frog   724 -PCTPRRLSLAESFTNLRESTTTMSTSLGLVRLLKERGISAAVYNPQTWDRAGKASLINHTLPKM 787

  Fly   938 LNTPAGPNFSPTVTPCNSPEGSPPRAQSPEPLFGLLSCGADLIRRKIVGDQHQQQQQKQRSSLSK 1002
            ...|:.|..||..||.:||.....:..|| |....|:                   .|..||:.|
 Frog   788 AIIPSTPPNSPMPTPNSSPPSLDFKCTSP-PYDNFLA-------------------SKPASSILK 832

  Fly  1003 QQQQKIMLSHLERR---ALRSLNLIEKVESIGLENIISAQRGLGSGIANRSSSPLSSGSLQSLHT 1064
            :.::|..:...|.:   ::.:|||::||:..|:..                    :|||     |
 Frog   833 EVREKKNIRSSECQTDVSVSNLNLVDKVKKFGIAK--------------------ASGS-----T 872

  Fly  1065 SSNSIVDDIHFDRAQIKGVLHRGLKSPTPATASTSAAAAASGPGISTSSSTSAYNSDDSDDQGLV 1129
            .::::.|            .|:|.:.  ||...........|..|:..:.|||..:     ..|.
 Frog   873 VTHALSD------------CHKGTQG--PARTYVPGGLVPEGLPINYPAVTSAIGA-----LHLN 918

  Fly  1130 MKIKPSKSATPTTTGAAQSQPSSATTSN 1157
            ..|:.::| .||..|::......||.::
 Frog   919 SGIRRNRS-FPTMVGSSMQMKGPATLTS 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
miltNP_001245927.1 HAP1_N 261..515 CDD:461455 96/264 (36%)
Milton 614..792 CDD:463588 58/204 (28%)
trak1XP_017950014.1 HAP1_N 19..324 CDD:461455 101/302 (33%)
Milton 387..558 CDD:463588 58/197 (29%)

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