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Protein Alignment eIF3h and Eif3h

DIOPT Version :10

Sequence 1:	NP_524834.2	Gene:	eIF3h / 45682	FlyBaseID:	FBgn0022023	Length:	338	Species:	Drosophila melanogaster
Sequence 2:	NP_942046.1	Gene:	Eif3h / 299899	RGDID:	735178	Length:	352	Species:	Rattus norvegicus

Alignment Length:	316	Identity:	147/316 - (46%)
Similarity:	217/316 - (68%)	Gaps:	2/316 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 DNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDKCLEITNCFPFPK--SGDETMDEE 78
            |:.:..||.|||.|:|::||..||....::.||.||||||:..||||||||||:  ..|...||.
  Rat    33 DSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEV 97

  Fly    79 MYQLTVMRRLRRVNVDHLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFL 143
            .||:.:||.||.||:||||||||||:..|:.::.|||:||:.||.:||||||::||..|:::|.|
  Rat    98 QYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSL 162

  Fly   144 CLKAYRLTPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVIKNSPLTNIMMSELNELLPEDKG 208
            .||||||||:.:::.|:.||:|||.:...:.:|::|.|:|||||||.|.|::|.||.:.......
  Rat   163 SLKAYRLTPKLMEVCKEKDFSPEALKKANITFEHMFEEVPIVIKNSHLINVLMWELEKKSAVADK 227

  Fly   209 HNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFKQDTEKHRALAKLAAENAVRTSKG 273
            |..|.|.::..|...::.|::||||:.|:.::||.|.:...||..:||:...:...||..|.|:|
  Rat   228 HELLSLASSNHLGKNLQLLMDRVDEMSQDIIKYNTYMRNSSKQQQQKHQYQQRRQQENMQRQSRG 292

  Fly   274 EPTVPEEEVIKQFRPMTAPNRLTATITSGQINTHAQHIAQFCSQSLAKLFITESLQ 329
            ||.:|||::.|.|:|..||.|:.:.:.:|||||:.|:|.:|.:|:|.|||:.::||
  Rat   293 EPPLPEEDLSKLFKPHQAPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQ 348

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.