DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tapdelta and trap-4

DIOPT Version :10

Sequence 1:NP_610679.1 Gene:Tapdelta / 45680 FlyBaseID:FBgn0021795 Length:166 Species:Drosophila melanogaster
Sequence 2:NP_001370085.1 Gene:trap-4 / 176626 WormBaseID:WBGene00013238 Length:159 Species:Caenorhabditis elegans


Alignment Length:159 Identity:52/159 - (32%)
Similarity:77/159 - (48%) Gaps:15/159 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AICLIA-AVCASGVYGSCKATVSSFSTQDATILTQLAHVGEFTLQCSGAAPASLFAEFPCGKVVP 70
            |:||:| |:||.  ..|.|.:.|||||.|.....:...:.|||||||.......:.....|:::|
 Worm     7 ALCLVASALCAK--CESPKYSASSFSTTDGFFHYKTTFITEFTLQCSNNPKNIQYTAEVNGRLIP 69

  Fly    71 VAKVGDN--KYQVSWVEDIKQGSSGNVQVRLFDEDGYANVRKAQRDGDKVSSVKSLLDISVPTKG 133
            |: :.|.  |:||||..:.|...:....:.:|||:|.|...|     :.|:  |.|..:.....|
 Worm    70 VS-ISDETAKFQVSWTLEHKDAGAQTFNINIFDEEGAAQYAK-----NPVT--KPLFTVQQSHGG 126

  Fly   134 -AYKGPWIKAELLAAFLVGGFAYFAFTTK 161
             |.|.| |.:|.:|..:|....|:|...|
 Worm   127 LATKSP-ISSETVAVIIVVIGLYYAIRQK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TapdeltaNP_610679.1 TRAP-delta 5..165 CDD:398850 52/159 (33%)
trap-4NP_001370085.1 TRAP-delta 4..158 CDD:398850 52/159 (33%)

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