DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha68-1 and atp6v1a

DIOPT Version :9

Sequence 1:NP_001260426.1 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001007512.1 Gene:atp6v1a / 493238 XenbaseID:XB-GENE-479548 Length:617 Species:Xenopus tropicalis


Alignment Length:614 Identity:508/614 - (82%)
Similarity:561/614 - (91%) Gaps:1/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNLRKFKDEERESEYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYE 66
            |.|.|.:||||||::|.|:.||||||||..|:|:|||||||||:.||||||||||||||||||||
 Frog     4 SKLPKIRDEERESQFGYVHGVSGPVVTASNMAGAAMYELVRVGHCELVGEIIRLEGDMATIQVYE 68

  Fly    67 ETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMW 131
            |||||.||||||||||||||||||||||||||||||||:||...|.|||||:|:|.:|||:...|
 Frog    69 ETSGVCVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDISDSTQSIYIPRGINVSALSKDIKW 133

  Fly   132 EFNP-LNVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDG 195
            |||| .::||||||||||:||.|.||:|::.::::.||.:|||.||||.|:|:..|:|||.||:|
 Frog   134 EFNPSKSIRVGSHITGGDIYGAVMENSLIRHKIMLPPRNRGTVTYIAPPGHYDTSDVVLELEFEG 198

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            ...|.||:||||||..|||||||||||||.|||||||:|||||||||||||||||||||||||:|
 Frog   199 VKDKFTMVQVWPVRSIRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSL 263

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            ||||||||||||||||||||||||||||||||.|:||.|||||||||||||||||||||||||||
 Frog   264 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKTESIMKRTALVANTSNMPVAAREASIY 328

  Fly   326 TGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVK 390
            ||||||||||||||:|:||||||||||||||||||||||||||||||||||||||:|||||||||
 Frog   329 TGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVK 393

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||.
 Frog   394 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYT 458

  Fly   456 RALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQN 520
            |||||||||::.||||||||.||||||||||:||||||||||||||||:|||||||:||||||||
 Frog   459 RALDEYYDKHFQEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQN 523

  Fly   521 SYSPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKD 585
            .|:||||.||||||||||.|::|||:.||.||::||||||||||:.|||.||.|:|:|:||||||
 Frog   524 GYTPYDRFCPFYKTVGMLYNMIAFYDMARRAVDTTAQSDNKITWSIIREHMGEILYRLTSMKFKD 588

  Fly   586 PVKDGEQKIKADYDQLYEDLQQAFRNLED 614
            |||:||.||||||.||.||:|.|||:|||
 Frog   589 PVKEGEAKIKADYAQLLEDMQNAFRSLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-1NP_001260426.1 V-ATPase_V1_A 15..606 CDD:273411 492/591 (83%)
atp6v1aNP_001007512.1 V-ATPase_V1_A 17..609 CDD:273411 492/591 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 443 1.000 Domainoid score I533
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H123934
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60789
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.030

Return to query results.
Submit another query.