DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-1 and Vha68-2

DIOPT Version :10

Sequence 1:NP_523560.2 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_652004.2 Gene:Vha68-2 / 45012 FlyBaseID:FBgn0263598 Length:614 Species:Drosophila melanogaster


Alignment Length:614 Identity:564/614 - (91%)
Similarity:593/614 - (96%) Gaps:0/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSNLRKFKDEERESEYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVY 65
            ||||::|.||||||:||||:|||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MSNLKRFDDEERESKYGRVFAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVY 65

  Fly    66 EETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEM 130
            |||||||||||||||||||||||||||||||||||||||:||..:|.|||||||||..:|||...
  Fly    66 EETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINELTESIYIPKGVNVPSLSRVAS 130

  Fly   131 WEFNPLNVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDG 195
            ||||||||:||||||||||||:||||||||.:|||.||||||||||||:|||.::|:||||||||
  Fly   131 WEFNPLNVKVGSHITGGDLYGLVHENTLVKHKMIVNPRAKGTVRYIAPSGNYKVDDVVLETEFDG 195

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            |||||||||||||||||||||||||||||||:.||||||||||||||||||||||||||||||||
  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIY 325

  Fly   326 TGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVK 390
            ||||||||||||||||:||||||||||||||||||||||||||||||||||||||:|||||||||
  Fly   326 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVK 390

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455

  Fly   456 RALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQN 520
            ||||::||||:|||||||||||||||||||||||||||||||||||||:||||||||||||||||
  Fly   456 RALDDFYDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQN 520

  Fly   521 SYSPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKD 585
            |||.|||.|||||||||||||:.||:.|||:|||||||:||||||.|||:||.||||||||||||
  Fly   521 SYSSYDRFCPFYKTVGMLRNIIDFYDMARHSVESTAQSENKITWNVIREAMGNIMYQLSSMKFKD 585

  Fly   586 PVKDGEQKIKADYDQLYEDLQQAFRNLED 614
            ||||||.|||||::||:||||||||||||
  Fly   586 PVKDGEAKIKADFEQLHEDLQQAFRNLED 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-1NP_523560.2 V-ATPase_V1_A 15..606 CDD:273411 543/590 (92%)
Vha68-2NP_652004.2 V-ATPase_V1_A 16..606 CDD:273411 543/589 (92%)

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