Protein Alignment Vha68-1 and ATPsynbeta

DIOPT Version :9

• Sequence 1: NP_001260426.1
• Gene: Vha68-1 / 45668
• FlyBaseID: FBgn0265262
• Length: 614
• Species: Drosophila melanogaster
• Sequence 2: NP_001259081.1
• Gene: ATPsynbeta / 43829
• FlyBaseID: FBgn0010217
• Length: 511
• Species: Drosophila melanogaster
• Alignment Length: 563
• Identity: 130/563 - (23%)
• Similarity: 223/563 - (39%)
• Gaps: 163/563 - (28%)

  Fly    17 GRVYAVSG------------PVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYEETS 69
            |::.||.|            |::.|..:...:...::.|..:  :|     |..:.||.: :.|.
  Fly    44 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQH--LG-----ENTVRTIAM-DGTE 100

  Fly    70 GVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMWEFN 134
            |:..|..||.||.|:.:.:|...:|.|.:.|..|:.:.|        |...:.||...:|..||.
  Fly   101 GLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERG--------PIDTDKTAAIHAEAPEFV 157

  Fly   135 PLNVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDGEITK 199
            .::                     |:|.::|
  Fly   158 QMS---------------------VEQEILV---------------------------------- 167

  Fly   200 HTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTV--------I 256
                                      ||.:|:|.|.|..:||...:.|..|.||||        :
  Fly   168 --------------------------TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNV 206

  Fly   257 SQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRT---ALVANTSNMPVA 318
            ::|...||     ::.|.|||..|.:::..:.      |:|...|:..:|   |||....|.|..
  Fly   207 AKAHGGYS-----VFAGVGERTREGNDLYNEM------IEGGVISLKDKTSKVALVYGQMNEPPG 260

  Fly   319 AREASIYTGITLSEYFRDM-GYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATF 382
            ||.....||:|::|||||. |.:|.:..|:..|:.:|..|:|..|..:|:..||...|...:.:.
  Fly   261 ARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSM 325

  Fly   383 YERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINW 447
            .||....|       :||::.|.|:..|..|.:||..:.|...:.....|.:.:|:...:|:::.
  Fly   326 QERITTTK-------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 383

  Fly   448 LISYSKYMRALDEYYDKNY--PEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAK 510
            |.|.|:.|       |.|.  .|...:...|::|||:.:.|.:|:.::|...|:|.||:|:..|:
  Fly   384 LDSTSRIM-------DPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAR 441

  Fly   511 LLKDDFLQQNSYSPYD----------RVCPFYKTVGMLRNIMA 543
            .:: .||.|    |:.          ::.|..:|:.....|:|
  Fly   442 KIQ-RFLSQ----PFQVAEVFTGHAGKLVPLEQTIKGFSAILA 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha68-1	NP_001260426.1	V-ATPase_V1_A	15..606	CDD:273411	130/563 (23%)
ATPsynbeta	NP_001259081.1	PRK09280	44..507	CDD:236447	130/563 (23%)
		ATP-synt_ab_N	46..112	CDD:280947	15/73 (21%)
		F1-ATPase_beta	114..393	CDD:238553	88/392 (22%)
		ATP-synt_ab_C	401..508	CDD:278722	21/84 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454773
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840