Protein Alignment Vha68-1 and ATPsynbetaL

DIOPT Version :10

• Sequence 1: NP_523560.2
• Gene: Vha68-1 / 45668
• FlyBaseID: FBgn0265262
• Length: 614
• Species: Drosophila melanogaster
• Sequence 2: NP_648836.2
• Gene: ATPsynbetaL / 39761
• FlyBaseID: FBgn0036568
• Length: 622
• Species: Drosophila melanogaster
• Alignment Length: 650
• Identity: 155/650 - (23%)
• Similarity: 247/650 - (38%)
• Gaps: 194/650 - (29%)

  Fly     2 SNLRKFKDE-----------------ERESEYGRVYAVSGPVV------------TAEAMSGSAM 37
            :.|.|.|||                 |.:...|.::||.|||:            .|..:..:.:
  Fly    72 AELVKKKDEAEDECEEKKSDGGGKKLESKGRKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPI 136

  Fly    38 YELVRVGYYELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQR 102
            ..||...::.|...|:|       ....:.|.|:..|.|||.||.|:.|.:|..::|.|.:.:..
  Fly   137 ANLVLEVFHHLGNNIVR-------CVAMDSTEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGD 194

  Fly   103 PLRDIGVMTNSIYIPKGVNTTALSRSEMWEFNPLNVRVGSHITGGDLYGVVHENTLVKQRMIVAP 167
            |:.|.|.:.:                                   |.|..:|..
  Fly   195 PIDDRGEVKS-----------------------------------DFYSFIHNE----------- 213

  Fly   168 RAKGTVRYIAPAGNYNLEDIVLETEFDGEITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLD 232
                     ||    .|.|:.::.|.                              |.||.:|:|
  Fly   214 ---------AP----ELTDLSVKPEI------------------------------LVTGIKVID 235

  Fly   233 SLFPCVQGGTTAIPGAFGCGKTVISQALSK---YSNSDVIIYVGCGER---GNEMSEVLRDFPEL 291
            .|.|.|:||...:.|..|.||||:...|..   .|:....::||.|||   ||::...:.:...:
  Fly   236 LLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGAGERTREGNDLYHEMIESKVI 300

  Fly   292 TCEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDM-GYNVAMMADSTSRWAEAL 355
            :.|.|.      .:..||....|.|..||...:.||:|::|||||: |.:|.:..|:..|:.:|.
  Fly   301 SLEDDS------SKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIFRFTQAG 359

  Fly   356 REISGRLAEMPADSGYPAYLGARLATFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTS 420
            .|:|..|..:|:..||...||..:.|..||.       ...|.||::.|.||..|..|.|||..:
  Fly   360 SEVSALLGRIPSAVGYQPTLGTDMGTMQERI-------TSTRNGSITSVQAVYVPADDLSDPAPA 417

  Fly   421 ATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALD------EYYDKNYPEFVPLRTKVKEI 479
            ||...:.....|.:.:|:...:|:::.|.|.|   |.||      |:|:        :...|::.
  Fly   418 ATFSHLDATTVLSRPIAELGIYPAVDPLDSSS---RILDPDVVGEEHYN--------VARAVQKT 471

  Fly   480 LQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQNSYSPYD----------RVCPFYKT 534
            ||..:.|.:|:.::|...|:|.||:|:..|:.:: .||.|    |:.          ::.|..|.
  Fly   472 LQAYKSLQDIIAILGMDELSEEDKLTVARARKMQ-RFLSQ----PFQVAEIFTGHPGKLVPVEKC 531

  Fly   535 VGMLRNIM----------AFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKDPVKD 589
            |...:.::          |||... .|.|..|::      ..:..||.|......:...||..||
  Fly   532 VEGFKRLLNGEYDDIPEIAFYMVG-DAEEVLAKA------TQLAASMSGDAPPAKAEAKKDEKKD 589

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha68-1	NP_523560.2	V-ATPase_V1_A	15..606	CDD:273411	148/619 (24%)
ATPsynbetaL	NP_648836.2	AtpD	103..570	CDD:439825	142/598 (24%)