DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-1 and atp6v1al

DIOPT Version :9

Sequence 1:NP_001260426.1 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_031747187.1 Gene:atp6v1al / 394868 XenbaseID:XB-GENE-22169633 Length:617 Species:Xenopus tropicalis


Alignment Length:614 Identity:494/614 - (80%)
Similarity:557/614 - (90%) Gaps:1/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNLRKFKDEERESEYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYE 66
            |.|.|..|||:||..|.|:.||||||.|..|:|:|||||||||:.||||||||||||:|||||||
 Frog     4 SKLPKLIDEEKESMMGFVHGVSGPVVIASQMAGAAMYELVRVGHAELVGEIIRLEGDLATIQVYE 68

  Fly    67 ETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMW 131
            |||||.||||||||||||||||||||||:|||||||||:||..:|.|||||:|:|.|||||...|
 Frog    69 ETSGVCVGDPVLRTGKPLSVELGPGIMGNIFDGIQRPLKDITDLTKSIYIPRGINVTALSRDIKW 133

  Fly   132 EFNP-LNVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDG 195
            ||.| .::|.|||:||||:||:|.||:|:|.:::|.||:.|||.||||.|||::.|:|:|.:|:|
 Frog   134 EFLPDKSIRAGSHVTGGDIYGIVTENSLIKHKIMVPPRSCGTVTYIAPPGNYDISDVVMELDFEG 198

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            ...|.||:|||||||.||..||||||:||.|||||||:|||||||||||||||||||||||||||
 Frog   199 VKEKLTMVQVWPVRQIRPAAEKLPANYPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQAL 263

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            |||||||||:||||||||||||||||||||||.|:||.||:|||||.||||||||||||||||||
 Frog   264 SKYSNSDVIVYVGCGERGNEMSEVLRDFPELTMEVDGKTETIMKRTTLVANTSNMPVAAREASIY 328

  Fly   326 TGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVK 390
            ||||||||||||||||:||||||||||||||||||||||||||||||||||||||:||||||||:
 Frog   329 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVR 393

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            |||:|.||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||
 Frog   394 CLGSPRREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYM 458

  Fly   456 RALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQN 520
            |||||:|::|:|:.|||||||||||||||||:||||||||.||||.||:|||||||:||||||||
 Frog   459 RALDEFYERNFPDLVPLRTKVKEILQEEEDLAEIVQLVGKGSLAEADKITLEVAKLIKDDFLQQN 523

  Fly   521 SYSPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKD 585
            .||.|||.|||||||||::|::|||:.||||||:|||::|||||..|||::|.|:|:||||||||
 Frog   524 GYSAYDRFCPFYKTVGMIQNMIAFYDMARHAVEATAQAENKITWAIIRENLGDILYKLSSMKFKD 588

  Fly   586 PVKDGEQKIKADYDQLYEDLQQAFRNLED 614
            ||||||.||||||.||:|::|.|||:|||
 Frog   589 PVKDGEAKIKADYAQLHEEMQNAFRSLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-1NP_001260426.1 V-ATPase_V1_A 15..606 CDD:273411 479/591 (81%)
atp6v1alXP_031747187.1 V-ATPase_V1_A 19..609 CDD:273411 479/589 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 278 1.000 Domainoid score I1682
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1027 1.000 Inparanoid score I278
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D160349at33208
OrthoFinder 1 1.000 - - FOG0001869
OrthoInspector 1 1.000 - - otm48091
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1565
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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