DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-1 and atp6v1aa

DIOPT Version :10

Sequence 1:NP_523560.2 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_957429.1 Gene:atp6v1aa / 394110 ZFINID:ZDB-GENE-040426-1143 Length:617 Species:Danio rerio


Alignment Length:614 Identity:507/614 - (82%)
Similarity:563/614 - (91%) Gaps:1/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNLRKFKDEERESEYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYE 66
            |.|.|.:||||||::|.|:.||||||||.:|:|:|||||||||:.||||||||||||||||||||
Zfish     4 SKLPKIRDEERESQFGYVHGVSGPVVTASSMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYE 68

  Fly    67 ETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMW 131
            |||||.||||||||||||||||||||||||||||||||:||..:|.|||||:|||..||:|...|
Zfish    69 ETSGVCVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINDLTQSIYIPRGVNIGALNRDLKW 133

  Fly   132 EFNPL-NVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDG 195
            :|.|: |:|||||:||||:||:|:||:|:|.::::.||::|||.|:||.|||::.|:|||.||:|
Zfish   134 DFTPINNLRVGSHVTGGDIYGLVNENSLIKHKLMLPPRSRGTVTYVAPPGNYDVSDVVLELEFEG 198

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            ...|.||:|||||||.|||||||||||||.|||||||:|||||||||||||||||||||||||:|
Zfish   199 VKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSL 263

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            ||||||||||||||||||||||||||||||||.|:.|..||||||||||||||||||||||||||
Zfish   264 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVGGKVESIMKRTALVANTSNMPVAAREASIY 328

  Fly   326 TGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVK 390
            ||||||||||||||||:||||||||||||||||||||||||||||||||||||||:|||||||||
Zfish   329 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVK 393

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||.
Zfish   394 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYT 458

  Fly   456 RALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQN 520
            |||||||||::.||||||||.|||||.||||:||||||||||||||||:|||||||:||||||||
Zfish   459 RALDEYYDKHFQEFVPLRTKAKEILQGEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQN 523

  Fly   521 SYSPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKD 585
            .|:||||.||||||||:|.|::|||:.||||||:||||||||||..|||.||.|:|::|||||||
Zfish   524 GYTPYDRFCPFYKTVGILSNMIAFYDLARHAVETTAQSDNKITWAQIREHMGEILYRISSMKFKD 588

  Fly   586 PVKDGEQKIKADYDQLYEDLQQAFRNLED 614
            |||:||.||||||.||.||:|.:||.|||
Zfish   589 PVKEGEAKIKADYAQLLEDMQNSFRTLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-1NP_523560.2 V-ATPase_V1_A 15..606 CDD:273411 492/591 (83%)
atp6v1aaNP_957429.1 V-ATPase_V1_A 17..609 CDD:273411 492/591 (83%)

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