DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha68-1 and atp6v1ab

DIOPT Version :10

Sequence 1:NP_523560.2 Gene:Vha68-1 / 45668 FlyBaseID:FBgn0265262 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_021325991.1 Gene:atp6v1ab / 337583 ZFINID:ZDB-GENE-030131-9529 Length:617 Species:Danio rerio


Alignment Length:614 Identity:510/614 - (83%)
Similarity:563/614 - (91%) Gaps:1/614 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNLRKFKDEERESEYGRVYAVSGPVVTAEAMSGSAMYELVRVGYYELVGEIIRLEGDMATIQVYE 66
            |.|.|.:|||||.::|.|:.||||||||.:|:|:|||||||||:.||||||||||||||||||||
Zfish     4 SKLAKIRDEEREGQFGYVHGVSGPVVTASSMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYE 68

  Fly    67 ETSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLRDIGVMTNSIYIPKGVNTTALSRSEMW 131
            |||||:||||||||||||||||||||||||||||||||:||..:|.|||||:|||..||:|...|
Zfish    69 ETSGVSVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDINDLTQSIYIPRGVNIGALNRDLKW 133

  Fly   132 EFNP-LNVRVGSHITGGDLYGVVHENTLVKQRMIVAPRAKGTVRYIAPAGNYNLEDIVLETEFDG 195
            ||.| .|:||||||||||:||.|.||:|:|.::::.|:::|||.|:||.|||::.|:|||.||:|
Zfish   134 EFTPSKNLRVGSHITGGDIYGNVFENSLIKHKIMLPPKSRGTVTYVAPPGNYDVSDVVLELEFEG 198

  Fly   196 EITKHTMLQVWPVRQPRPVTEKLPANHPLFTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQAL 260
            ...|.||:|||||||.|||||||||||||.|||||||:|||||||||||||||||||||||||:|
Zfish   199 VKEKFTMMQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSL 263

  Fly   261 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTCEIDGVTESIMKRTALVANTSNMPVAAREASIY 325
            ||||||||||||||||||||||||||||||||.|:.|..||||||||||||||||||||||||||
Zfish   264 SKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVGGKVESIMKRTALVANTSNMPVAAREASIY 328

  Fly   326 TGITLSEYFRDMGYNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLATFYERAGRVK 390
            ||||||||||||||||:||||||||||||||||||||||||||||||||||||||:|||||||||
Zfish   329 TGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVK 393

  Fly   391 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYM 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||.
Zfish   394 CLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYT 458

  Fly   456 RALDEYYDKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKVTLEVAKLLKDDFLQQN 520
            |||||||||::|||||||||.||||||||||:||||||||||||||||:|||||||:||||||||
Zfish   459 RALDEYYDKHFPEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQN 523

  Fly   521 SYSPYDRVCPFYKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRESMGGIMYQLSSMKFKD 585
            .|:||||.||||||||:|.|::|||:.||||||:||||||||||..|||.||.|:|::|||||||
Zfish   524 GYTPYDRFCPFYKTVGVLSNMIAFYDMARHAVETTAQSDNKITWAMIREHMGEILYRISSMKFKD 588

  Fly   586 PVKDGEQKIKADYDQLYEDLQQAFRNLED 614
            |||:||:||||||.||.||:|.|||.|||
Zfish   589 PVKEGEEKIKADYAQLLEDMQNAFRTLED 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha68-1NP_523560.2 V-ATPase_V1_A 15..606 CDD:273411 495/591 (84%)
atp6v1abXP_021325991.1 V-ATPase_V1_A 17..609 CDD:273411 495/591 (84%)

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