DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and ISW2

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_014948.1 Gene:ISW2 / 854480 SGDID:S000005831 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:1772 Identity:354/1772 - (19%)
Similarity:569/1772 - (32%) Gaps:759/1772 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   753 KEEQSSAI---KTETPD----DSDDSEFEAKEASDDDENTISKQEEAEQEIDHKKEIDELEADND 810
            :|||.|..   |:|:|.    |:.||:   ...|.||:|....:|.:::||              
Yeast     5 QEEQRSDTKNSKSESPSEVLVDTLDSK---SNGSSDDDNIGQSEELSDKEI-------------- 52

  Fly   811 LSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEEDLSTVKTDTDM 875
            .:||....:|.:::    |::.:...||:.....|.:......:.....|:.......:|...|.
Yeast    53 YTVEDRPPEYWAQR----KKKFVLDVDPKYAKQKDKSDTYKRFKYLLGVTDLFRHFIGIKAKHDK 113

  Fly   876 EEQDEQEDGLKSLMADADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTP 940
            ..|..    ||.|.:||:..|.:..:.|::.....|.:...||..:|:..:...:|......|:.
Yeast   114 NIQKL----LKQLDSDANKLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEIVDTYQEDIFVSE 174

  Fly   941 VP-FLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGPHLIV 1004
            .| |:....||:||..||:||::::|.||:||||||||||||:|||:.|.:|...|...||.||:
Yeast   175 SPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLII 239

  Fly  1005 VPSSVMLNWEMEFKKWCPGFKILTYYGSQKERK--LKRVGWTKPNAFHVCITSYKLVVQDQQSFR 1067
            ||.|.:.||..||.||.|...:|..:|.:..|.  ::.:  .....|.|.||||::|::::.:.:
Yeast   240 VPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNI--ILEARFDVLITSYEMVIREKNALK 302

  Fly  1068 RKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHR 1132
            |..|:|:::|||..|||.:|...|::..|.::.|||:|||||||:|.|||:|::||:|.:|....
Yeast   303 RLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSE 367

  Fly  1133 EFKEWFSNPMTGMIEGNMEYN-ETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQ 1196
            .|.|||.       :.|.|.: |.:|.:||.|:.||||||:|.:|||.:..|.|..:...:::.|
Yeast   368 LFDEWFE-------QNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQ 425

  Fly  1197 RYLYEDFMSR-------------AKTRETLQTGNLLSVINVLMQLRKVCNHPNMFEARPTISPFQ 1248
            ...|:..:.:             .|||          ::|::|||||.||||.:||         
Yeast   426 IQWYKSLLEKDIDAVNGAVGKREGKTR----------LLNIVMQLRKCCNHPYLFE--------- 471

  Fly  1249 MDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAP 1313
                                                                             
Yeast   472 ----------------------------------------------------------------- 471

  Fly  1314 LPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMRLEGSKIMPMRNLLPSGRVLKRVSAS 1378
                                             ||.|.                           
Yeast   472 ---------------------------------GAEPG--------------------------- 476

  Fly  1379 INPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKP 1443
                                                                             
Yeast   477 ----------------------------------------------------------------- 476

  Fly  1444 FFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQK 1508
                                                                             
Yeast   477 ----------------------------------------------------------------- 476

  Fly  1509 QSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRRRTDATPIYGEDCREAIQRC 1573
                             .||...|                                         
Yeast   477 -----------------PPYTTDE----------------------------------------- 483

  Fly  1574 MQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRI 1638
                                             ||:                             
Yeast   484 ---------------------------------HLI----------------------------- 486

  Fly  1639 RRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLR 1703
                                                               ::.||:..:|:||:
Yeast   487 ---------------------------------------------------FNSGKMIILDKLLK 500

  Fly  1704 QLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFN-GDKRIFCFILS 1767
            :||..|.|||||:||:::||:||.:..:....|.|:||||..|:|...::.:| .:...|.|:|:
Yeast   501 RLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLT 565

  Fly  1768 TRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQ 1832
            ||:||:||||..|||||.:||||||..|.||.||.|||||.:.||:||.|:|..||..::::|.|
Yeast   566 TRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQ 630

  Fly  1833 KRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESSQEKSENKDRIVATTTLSDTPSTVVET 1897
            |..|..:.|:.|....|....::..||..|.|.......::|:                      
Yeast   631 KLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEKKA---------------------- 673

  Fly  1898 EKQSLRAFEHALAAAEDEQDVQATKTAKAEVAADLAEFDENIPIATEDPNAEGGPQVELSKADLE 1962
                                      :|..|.||:.:..:.....|::.||:   ...|...||:
Yeast   674 --------------------------SKVTVDADIDDILKKGEQKTQELNAK---YQSLGLDDLQ 709

  Fly  1963 MQNLVKQLSPIERYAMRFVEETGAAWTAEQLRAAEAELEAQKR------EWEANRLAAMHKEEEL 2021
            ..|.::..|..|             |..:..         ||:      ||    :....:|.. 
Yeast   710 KFNGIENQSAYE-------------WNGKSF---------QKKSNDKVVEW----INPSRRERR- 747

  Fly  2022 LKQETEAEEMLTYSRKDSSNQV--WISRNTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMY---EL 2081
                   .|..|||..|...::  ..|::..:|.|....|..|:       :.:...|.:   ||
Yeast   748 -------REQTTYSVDDYYKEIIGGGSKSASKQTPQPKAPRAPK-------VIHGQDFQFFPKEL 798

  Fly  2082 EPIAETDLPPVYVRK---------------------------EHKRSRTDAGYDG----SRRPNK 2115
            :.:.|.:  .:|.:|                           |:|.:....|:.|    .||..:
Yeast   799 DALQEKE--QLYFKKKVNYKVTSYDITGDIRNEGSDAEEEEGEYKNAANTEGHKGHEELKRRIEE 861

  Fly  2116 MRREDNYVPPRSLFDRPTPQLARLRRELKSQRFRGSFKPNMPIPGLKPQLPTKPLTEPEAMAEWC 2180
            .:.:.|..|..:..|           ||:.|                 :|.:|      |...|.
Yeast   862 EQEKINSAPDFTQED-----------ELRKQ-----------------ELISK------AFTNWN 892

  Fly  2181 VFEDMAILHVLV-----NLQGLPCSLMLLSPGQTPNWDLVSEMVNFCSKTYRSARQCRWR----- 2235
            ..:.||.::...     :::.:..|:    ..:||      |.|...:|.:       |.     
Yeast   893 KRDFMAFINACAKYGRDDMENIKKSI----DSKTP------EEVEVYAKIF-------WERLKEI 940

  Fly  2236 --YETHIQPREEGKVVESPKKQKKLK--PTL---RTEYLKSPLRYLRTTQLYVSDNNASFYKTMR 2293
              :|.::...|.|:     ||.:|||  .||   :.|..|.||..|...  |..:|....|.|:.
Yeast   941 NGWEKYLHNVELGE-----KKNEKLKFQETLLRQKIEQCKHPLHELIIQ--YPPNNARRTYNTLE 998

  Fly  2294 SRFDSIK-TAYLKKAPPPKRQFSAPSLMN-----------------PKHMEVLQEFGILNYDQPV 2340
            .:|..:. ..|..:|.....:.....:|:                 .|.:..|....:..|:|| 
Yeast   999 DKFLLLAVNKYGLRADKLYEKLKQEIMMSDLFTFDWFIKTRTVHELSKRVHTLLTLIVREYEQP- 1062

  Fly  2341 SPQNIAAMKANKIREKQRGQQMSQPPVGVGVVQQMQQQSQQQQQPAPPPLPQQQQPQQVVQQVQQ 2405
                    .|||.:..:........|:         .|::..:....|.||        ...|..
Yeast  1063 --------DANKKKRSRTSATREDTPL---------SQNESTRASTVPNLP--------TTMVTN 1102

  Fly  2406 QQQQQQQQQQQQVVQQQ 2422
            |:.......::..:.|:
Yeast  1103 QKDTNDHVDKRTKIDQE 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727
HepA 692..>1235 CDD:440319 163/505 (32%)
DEXQc_SRCAP 949..1171 CDD:350761 99/224 (44%)
SF2_C_SNF 1685..1817 CDD:350180 64/132 (48%)
DISARM_DrmD_b <1702..>1936 CDD:468472 80/234 (34%)
HEC1 <1858..>2031 CDD:444066 24/178 (13%)
SP1-4_N 2486..>2819 CDD:425404
ISW2NP_014948.1 PLN03142 1..1093 CDD:215601 348/1736 (20%)
Blue background indicates that the domain is not in the aligned region.

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