DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and SWR1

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_010621.1 Gene:SWR1 / 851934 SGDID:S000002742 Length:1514 Species:Saccharomyces cerevisiae


Alignment Length:1481 Identity:515/1481 - (34%)
Similarity:734/1481 - (49%) Gaps:376/1481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 HWDYLLEEMVWLAADFAQERKWKKNAAKKCAKMVQKYFQDKATAAQRAEKAQELQLKRVASFIAR 618
            |.|:|:.:.:.::..|....|.:...|||.::|::::|:..|.|.:|..|.:|...|.:|.|..:
Yeast   351 HTDHLINQGIHMSKLFRSSTKARIARAKKVSQMIEQHFKHVAGAEERKAKEEERHKKSLARFAVQ 415

  Fly   619 EVKSFWSNVEKLVEYKHQTKIEEKRKQALD--QHLSFIVDQTEKFSQQLVEGMNKSVAD-----T 676
            .||..|:..||  .|:...|.||::.:.::  ||||.::::    |.||:|.....|.|     |
Yeast   416 AVKKRWNMAEK--AYRILRKDEEEQLKRIEGKQHLSKMLEK----STQLLEAQLNQVNDDGRSST 474

  Fly   677 PSLNSSRLTSPKRESDDDFRPESGSEDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLP 741
            ||.:|:.:.|   |||||...|..:..||:     ||..|||..|.:..:.|: ...|:.||   
Yeast   475 PSSDSNDVLS---ESDDDMDDELSTSSDED-----EEVDADVGLENSPASTEA-TPTDESLN--- 527

  Fly   742 PGYLENRDKLMKEEQSSAI-----KTETPDDSDDSEFEAKEAS--DDDENTISKQEEAEQEIDHK 799
              .::.::|......||.:     |.|.....|..|..:.|:|  ..:|::|....|.|.:.::.
Yeast   528 --LIQLKEKYGHFNGSSTVYDSRNKDEKFPTLDKHESSSSESSVMTGEESSIYSSSENESQNEND 590

  Fly   800 KEIDELEADNDLSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAATEDEE 864
            :|.|:......||.  |..|.:.           :..|.:||..:|.|...|:.|.|: ..:|:.
Yeast   591 RESDDKTPSVGLSA--LFGKGEE-----------SDGDLDLDDSEDFTVNSSSVEGEE-LEKDQV 641

  Fly   865 DLSTV---KTDTDMEEQDEQEDGLKSLMADADATSGAAGSGSTAGASGNKDDMLNDAAALAESLQ 926
            |.|..   :....:..|:|..|.:|.:..||:.                               :
Yeast   642 DNSAATFERAGDFVHTQNENRDDIKDVEEDAET-------------------------------K 675

  Fly   927 PKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHL 991
            .:...||..:|  |||.||:.:||.||..||:||.::.....|||||||||||||||||:|||:|
Yeast   676 VQEEQLSVVDV--PVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYL 738

  Fly   992 ACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRVGWTKPNAFHVCITSY 1056
            ||.|.||||||||||:||:||||||||::.||||:||||||.::||.||.||.||:||||||.||
Yeast   739 ACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSY 803

  Fly  1057 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMELWSLMH 1121
            :||||||.||:||:|:|::||||.|||||:|.|||.||||:|:||||||||||||:|.|||||::
Yeast   804 QLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLY 868

  Fly  1122 FLMPYV---------FSSHREFKEWFSNPMTGMIE-----GNMEYNETLITRLHKVIRPFLLRRL 1172
            ||||..         |:....|::||..|:..:||     |..:..:..:.:||:|:||:|||||
Yeast   869 FLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRL 933

  Fly  1173 KKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNM 1237
            |.:||||||.||||::.|:||.|||:||:||||||:|:.||.:||.:|::|.||||||||||||:
Yeast   934 KADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKATLASGNFMSIVNCLMQLRKVCNHPNL 998

  Fly  1238 FEARPTISPFQMDGITFHTPRLVCDIMEY--------------DPFTQINLETLNLLLLHLEQTM 1288
            ||.||.::.|.::    |     |...:|              :...:::|:.|||:....::.:
Yeast   999 FEVRPILTSFVLE----H-----CVASDYKDVERTLLKLFKKNNQVNRVDLDFLNLVFTLNDKDL 1054

  Fly  1289 TAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMR 1353
            |:|.:.:...|...:..:|:::                .:|..:.:|.:.               
Yeast  1055 TSYHAEEISKLTCVKNFVEEVN----------------KLRETNKQLQEE--------------- 1088

  Fly  1354 LEGSKIMPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSNSK 1418
                                                                             
Yeast  1089 ----------------------------------------------------------------- 1088

  Fly  1419 LLGARSQINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTAST 1483
             .|..|.:|          .||...:|..:                                   
Yeast  1089 -FGEASFLN----------FQDANQYFKYS----------------------------------- 1107

  Fly  1484 TSGQQLIRDPIVKDLATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAALKRM 1548
                                   .||                   |::..:.|        |..:
Yeast  1108 -----------------------NKQ-------------------KLEGTVDM--------LNFL 1122

  Fly  1549 AMINRRRTDATPIYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLLKSFE 1613
            .|:|:.|.|..||:|::..:.:.:    .|.:|..                ::....|.|:|..:
Yeast  1123 KMVNKLRCDRRPIFGKNLIDLLTK----DRRVKYD----------------KSSIIDNELIKPLQ 1167

  Fly  1614 ERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLAL-------- 1670
            .|..|.:.:...|.:..||..:..:|:....|:.         ::.|.:..|.|:..        
Yeast  1168 TRVLDNRKIIDTFAVLTPSAVSLDMRKLALGLND---------DSSVGENTRLKVMQNCFEVSNP 1223

  Fly  1671 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHI 1735
            ||.:.:::|..|||..|:||||||||.:..||:|||.||||.||||||||:|||||.||||||::
Yeast  1224 LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYL 1288

  Fly  1736 YLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQD 1800
            |:||||:|::|.||||.||||.|.||..||||:||||:|||||||||||||||||||.||.|.||
Yeast  1289 YMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQD 1353

  Fly  1801 RCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQS 1865
            |||||||||||||||.|||.|||.||||||||||.|.::.|:.|:|||.||...:::||...|..
Yeast  1354 RCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSELP 1418

  Fly  1866 EQDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAAAEDEQDVQATKTAKAEVAA 1930
            | :.|..:|....|..||.               :..|..|..||.||||.||:|...|..||..
Yeast  1419 E-NASGGDKPLIADADVAA---------------KDPRQLERLLAQAEDEDDVKAANLAMREVEI 1467

  Fly  1931 DLAEFDENIPIATEDPNAEGGPQVELSKADLEMQNLVKQLSPIERYAMRFV 1981
            |..:|||    :||...|.   :.|.:.|:|:.   .:..:.::.|.:||:
Yeast  1468 DNDDFDE----STEKKAAN---EEEENHAELDE---YEGTAHVDEYMIRFI 1508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 16/59 (27%)
HepA 692..>1235 CDD:440319 249/566 (44%)
DEXQc_SRCAP 949..1171 CDD:350761 145/235 (62%)
SF2_C_SNF 1685..1817 CDD:350180 102/131 (78%)
DISARM_DrmD_b <1702..>1936 CDD:468472 140/233 (60%)
HEC1 <1858..>2031 CDD:444066 36/124 (29%)
SP1-4_N 2486..>2819 CDD:425404
SWR1NP_010621.1 HSA 340..>393 CDD:214727 10/41 (24%)
HepA <649..1393 CDD:440319 382/1006 (38%)
DEXQc_SRCAP 696..932 CDD:350761 145/235 (62%)
Blue background indicates that the domain is not in the aligned region.

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