DRSC/TRiP Functional Genomics Resources

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Protein Alignment dom and AT3G54460

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_680129.1 Gene:AT3G54460 / 824611 AraportID:AT3G54460 Length:1378 Species:Arabidopsis thaliana


Alignment Length:1553 Identity:266/1553 - (17%)
Similarity:455/1553 - (29%) Gaps:585/1553 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 RISELQREGLWTERRLPKLQEPSRPKAHWD----YLLE-EMVWLAADFAQERKWKKN-------- 578
            |:|.|..:.:|.|..       .|.||.||    ::.: :::..|.:..:.|.:|.:        
plant   205 RVSILDGKSIWEEAN-------GRIKAIWDLSDCHVFDCKLLCNAPNSPKRRLFKLHEIFKSLPS 262

  Fly   579 --------------AAKKCAKMVQKYFQDKATAAQRAEKAQELQLKRVASF--IAREVKSFWSNV 627
                          :...|...|.....|...:.     ..:|..|.:.|.  :.|..:|..|.:
plant   263 PGNHDVSYSSRVLPSTDSCVSGVWDLSDDVLISI-----LMKLDTKDLFSIAAVCRLFRSLTSLI 322

  Fly   628 EKLVEYK---HQT-----KIEEKRKQALDQH---LSFIVDQTEKFSQQLVEGMNKSVADTPSLNS 681
            ...:..|   ||.     .:|.:||..:..|   |||..:....|....|.|...:.| .|.:. 
plant   323 VPCMNLKLFPHQQAAVGWMLERERKAEVSSHPLYLSFDTEDGFSFYVNAVTGDIITEA-APMVK- 385

  Fly   682 SRLTSPKRESDDDFRPESGSEDDEETIAKAEEDAADVKEEVTALAKESEMDFDDFLNDLPPG--- 743
                        |||  .|...||..:.|.          :|||:  ..:.....:.|.|.|   
plant   386 ------------DFR--GGMFCDEPGLGKT----------ITALS--LILKTQGTMADPPEGLPI 424

  Fly   744 -------------YLENRDKLMKEEQSSAIKTETPD---------------DSDDSEFEAKEASD 780
                         |....|:......|:..:.::|.               :|....|:.....|
plant   425 VWCTHKSDKKCAYYEYTSDQFTSNSMSAVKRFQSPSSCRNQVSFEAFRPLLESKSLPFKQARLMD 489

  Fly   781 DDENTI-SKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDD 844
            .|:.|: ||....|.|.:     ..:.|..||       |.:..:.....|:.|.|         
plant   490 PDDQTLESKNSNFENEFE-----THIPASLDL-------KAQCRKSLGNVRKNLLP--------- 533

  Fly   845 DSTAVDSTEESEDAATEDEEDLSTVK-------------TDTDMEEQDEQEDGLKSLMADADATS 896
               |.:...|..:..  :.:.:|..|             ||:|:|         ..:....|:.|
plant   534 ---AYNGASELSEVM--EAKRISNWKKCGMITGCKRKGLTDSDVE---------SDIWMQCDSCS 584

  Fly   897 --------GAAGSGSTAGASGNKD---DMLNDAAALAESLQP------------KGNTLSSTNVV 938
                    |.:.:||....|.|.|   ...||...|.:..||            .|....:.:..
plant   585 KWRRIIDEGVSVTGSAWFCSNNNDPAYQSCNDPEELWDKSQPIKYLQGFYTKGASGEESDNISFF 649

  Fly   939 TPVPFLLKHSLREYQHIGLDWLVTMNERKLN------------GILADEMGLGKTIQTIALLAHL 991
            |.|....|.|:.......|.||..:...||:            |:..|.:|..:..:...|.:.:
plant   650 TSVLREHKSSVSSTVKKALIWLAKLPLEKLSQMETVGLPGPVLGLKLDALGFQRIFRAFGLKSRV 714

  Fly   992 ACAKGNW--------------------------------GPHLIVVPSSVMLNWEMEFKKW-CPG 1023
            ......|                                ...|||||::::.:|..:.:|. |..
plant   715 EKGVTKWFYPKFLENLVFDVPALKVALCQPLDTFRLYLSKATLIVVPTNLVNHWLTQIQKHVCSD 779

  Fly  1024 FKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKK-------WKYLILDEAQN 1081
            ...:..:....|.....:.|.    :.|.||::..:..:...  |||       |..::|||...
plant   780 QLRILVWADHIELSPHSLAWD----YDVVITTFSRLSAEWNP--RKKSPLIQVHWLRVMLDEGHT 838

  Fly  1082 IKNFKS--QRWQLLLNFSTERRLLLTGTPLQN----DLMELWSLMHFLMPYVFSSHREFKEWFSN 1140
            :.:..|  .::|:.::.:...|.||||||..|    .|..:..|:.||...|:..:.:|  |.:.
plant   839 LGSSVSLTNKFQMAVSLTACNRWLLTGTPTPNTPNSQLSHIQPLLKFLHEEVYGENPKF--WEAG 901

  Fly  1141 PMTGMIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYL------ 1199
                                  ::|||     :.|:|:...:..:.:..|.:|:|::.|      
plant   902 ----------------------ILRPF-----EAEMEEGRLRLLQLLQRCMISSRKKDLQMIPPC 939

  Fly  1200 -----YEDFM-----SRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMFEARPTISPFQMDGITF 1254
                 |.:|:     |..:..||::...||:          ..|.|:..|:......::...||.
plant   940 IKKVTYLNFLPGHARSYNELVETVRRNILLA----------DWNDPSHVESLLNSKQWKFRSITI 994

  Fly  1255 HTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRC 1319
            ...||.|.:..:...|....:        :::||.|.:.:...|.......|:|.........||
plant   995 SNVRLSCCVAGHIKMTDAGHD--------IKETMDALLENDLDLWTEEYSFIQDSLIGGCNCKRC 1051

  Fly  1320 PNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMRLEGSKIMPMRNLLPSGRVLKRVSASINPVNM 1384
              |::                           .||  ..|.|.|:||                  
plant  1052 --GEW---------------------------CRL--PVITPCRHLL------------------ 1067

  Fly  1385 ALKPVVINSVVTTTSSSTTASSPTGALSVLSNSKLLGARSQINAPTPAKVAKTMQDGKPFFYLTP 1449
            .|..|.::|...|.|                     |........||..:|:. ::..|      
plant  1068 CLDCVALDSERCTIS---------------------GCGYLYEMQTPETLARP-ENPNP------ 1104

  Fly  1450 ATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTSGQQLIRDPIVKDLATHVKSTVQKQSIANG 1514
                                                     :.|:.|||                
plant  1105 -----------------------------------------KWPVPKDL---------------- 1112

  Fly  1515 KTEPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRRRTDATPIYGEDCREAIQRCMQATRS 1579
                   .|.:..||                         :.|..|                   
plant  1113 -------IELQPSYK-------------------------QDDWNP------------------- 1126

  Fly  1580 LKRSTWQTRGYANCCTAMAHRNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQN 1644
                .||                                             |..:.::...|..
plant  1127 ----DWQ---------------------------------------------STSSSKVSYLVDR 1142

  Fly  1645 LSSTHWQHEQRI--------ENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCG-KLQTMDR 1700
            |...|..:::.|        :|:.|..         |..||   .|....|...||| ::..:| 
plant  1143 LRKLHEGNKKSILSFNKTDNDNLEDNP---------PGTSE---AFLGKELHGQDCGSQMVFVD- 1194

  Fly  1701 LLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFI 1765
                      :||||:|..:.:.|:|..|...|..:.::....:...:...:..|..|..... :
plant  1195 ----------KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMA-L 1248

  Fly  1766 LSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIE---VNIL 1827
            |...||.:|::|:....|...:..|:.:::.|...|.||:|..|.:.:..|....|||   :..|
plant  1249 LMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFL 1313

  Fly  1828 KKANQK-RMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESSQEKSENKDRIVAT 1884
            :.|.:. |:||...||....||.  ...|:.||  :|.:.....|..:|:.|....|:
plant  1314 EDAEKSDRLLSGDYIEAKQETTR--SRRTLHDL--VESNYLSHLSFVRSDGKMEFAAS 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 13/97 (13%)
HepA 692..>1235 CDD:440319 123/684 (18%)
DEXQc_SRCAP 949..1171 CDD:350761 50/279 (18%)
SF2_C_SNF 1685..1817 CDD:350180 29/132 (22%)
DISARM_DrmD_b <1702..>1936 CDD:468472 45/187 (24%)
HEC1 <1858..>2031 CDD:444066 7/27 (26%)
SP1-4_N 2486..>2819 CDD:425404
AT3G54460NP_680129.1 F-box_SF 287..320 CDD:438852 6/37 (16%)
DEAD-like_helicase_N 330..>435 CDD:475120 27/132 (20%)
zf-CW 576..620 CDD:462181 10/43 (23%)
DEXDc_SHPRH-like <743..907 CDD:350766 40/198 (20%)
RING-HC 1048..>1072 CDD:438113 11/72 (15%)
SF2_C_SNF 1194..1299 CDD:350180 25/116 (22%)
Blue background indicates that the domain is not in the aligned region.

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