DRSC/TRiP Functional Genomics Resources

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Protein Alignment dom and AT3G16600

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_188282.1 Gene:AT3G16600 / 820911 AraportID:AT3G16600 Length:638 Species:Arabidopsis thaliana


Alignment Length:1019 Identity:187/1019 - (18%)
Similarity:294/1019 - (28%) Gaps:475/1019 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   907 ASGNKDDMLND----------AAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLV 961
            :||:.:::..:          .|||.:..|||........|:| || |::|     |.|.|:|:.
plant     8 SSGSDEEVQEEKTTVNERVIYQAALQDLKQPKTEKDLPPGVLT-VP-LMRH-----QKIALNWMR 65

  Fly   962 TMNERK---LNGILADEMGLGKTIQTIALL--------AHLACAKG-NWGPHLIVVPSSVMLNWE 1014
            ...:|.   |.|||||:.||||||.||:|:        :.....|| |.|..|||.|:||:..|.
plant    66 KKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWA 130

  Fly  1015 MEFKKWCPG---FKILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQD---------QQSFR 1067
            .|.|:....   ..:|.::||.:.:....:.     .:.|.:|:|.:|..:         ..|.|
plant   131 REVKEKVSDEHKLSVLVHHGSHRTKDPTEIA-----IYDVVMTTYAIVTNEVPQNPMLNRYDSMR 190

  Fly  1068 -------------------RKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDL 1113
                               |.:|..::||||..|||.::...:...:...:||..|||||::|.:
plant   191 GRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKV 255

  Fly  1114 MELWSLMHFLM--PYVF--SSHREFKEWF-SNPMTGMIEGNMEYNETLITRLHKVIRPFLLRRLK 1173
            .:|:|...||.  ||..  |.|:..|... ..|:.|            ..:|..::|..:|||.|
plant   256 DDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHG------------YKKLQAILRGIMLRRTK 308

  Fly  1174 KEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQLRKVCNHPNMF 1238
                       |.....:|....|:.:|::.:.....|     ::..::.:|::||:.||||   
plant   309 -----------EWSFYRKLELNSRWKFEEYAADGTLHE-----HMAYLLVMLLRLRQACNHP--- 354

  Fly  1239 EARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSHKSRLLAPPR 1303
                                                           |.:..| ||..    ..|
plant   355 -----------------------------------------------QLVNGY-SHSD----TTR 367

  Fly  1304 KLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMRLEGSKIMPMRNLLPS 1368
            |:                                                .:|.::.|..||:..
plant   368 KM------------------------------------------------SDGVRVAPRENLIMF 384

  Fly  1369 GRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSNSKLLGARSQINAPTPAK 1433
            ..:||                         .||||.       ||.|:              |.|
plant   385 LDLLK-------------------------LSSTTC-------SVCSD--------------PPK 403

  Fly  1434 VAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTSGQQLIRDPIVKDL 1498
            .......|..|.|...:.|...        ...|..|....|            ||..|.:..:.
plant   404 DPVVTLCGHVFCYECVSVNING--------DNNTCPALNCHS------------QLKHDVVFTES 448

  Fly  1499 ATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRRRTDATPIYG 1563
            |.        :|..|...:||:                  :..|.|.:|:..|.....|      
plant   449 AV--------RSCINDYDDPED------------------KNALVASRRVYFIENPSCD------ 481

  Fly  1564 EDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLLKSFEERCADLKPVFANFVI 1628
                                    |..:..|.|...|:..:.::.:...                
plant   482 ------------------------RDSSVACRARQSRHSTNKDNSISGL---------------- 506

  Fly  1629 YVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCG 1693
                |||                                                          
plant   507 ----VCA---------------------------------------------------------- 509

  Fly  1694 KLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGD 1758
                                                                             
plant   510 ----------------------------------------------------------------- 509

  Fly  1759 KRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIE 1823
                 .::|.::|.:|:|:..|..||..|..||||.:.||.||.|||||||.|.:.|:..:.|:|
plant   510 -----MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569

  Fly  1824 VNILKKANQKRMLSDMAIEGGNF----TTTYFKSSTIKDLFTME 1863
            ..||....:||.:...|:...|:    .:|..:.|.|...:.:|
plant   570 ERILTLHERKRNIVASALGEKNWQKFCDSTNTRRSRISVFWCVE 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727
HepA 692..>1235 CDD:440319 100/385 (26%)
DEXQc_SRCAP 949..1171 CDD:350761 73/269 (27%)
SF2_C_SNF 1685..1817 CDD:350180 25/131 (19%)
DISARM_DrmD_b <1702..>1936 CDD:468472 37/166 (22%)
HEC1 <1858..>2031 CDD:444066 1/6 (17%)
SP1-4_N 2486..>2819 CDD:425404
AT3G16600NP_188282.1 HepA <12..588 CDD:440319 180/988 (18%)
Blue background indicates that the domain is not in the aligned region.

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