DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dom and ATCHR12

DIOPT Version :10

Sequence 1:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster
Sequence 2:NP_187252.2 Gene:ATCHR12 / 819772 AraportID:AT3G06010 Length:1102 Species:Arabidopsis thaliana


Alignment Length:1702 Identity:369/1702 - (21%)
Similarity:572/1702 - (33%) Gaps:708/1702 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 LYTGNGPAALGGSGGLTPGTPTSGSLLSPALGGGSGTPNSAAQEFSFKAKQEVYVMQRISELQRE 534
            :|.|...::|..| .::|..|||    .||        |.|........:.|..:::     ||.
plant    49 IYHGASSSSLSDS-DVSPPLPTS----PPA--------NKAPYGADLMGEFEDALLK-----QRP 95

  Fly   535 GLWTERRLPKLQEPSRPKAHWDYLLEEMVWLAADFAQERKWKKNAAKKCAKMVQKYFQDKATAAQ 599
            ...:..||.:|.: :|.|:|....|.|:..|.:...::.:      .||  :::.|         
plant    96 DCESGSRLIQLLD-NRNKSHIQRRLSELEELPSTRGEDLQ------AKC--LLELY--------- 142

  Fly   600 RAEKAQELQLKRVASFIAREVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQ 664
             ..|.:|||.| |.:.::.|   ||..                            ::..:..||.
plant   143 -GLKLRELQGK-VRTAVSSE---FWLR----------------------------LNCADVSSQV 174

  Fly   665 LVEGMNKSVADTPSLNSSRLTSP--------KRESDDDFRPESGSEDDEETIAKAEEDAADVKEE 721
            ...||            .||..|        ..|:||.||    .:.|.|.:::.||:..::.| 
plant   175 FDWGM------------MRLPRPFYGVGDPFAMEADDQFR----KKRDAERLSRLEEEEKNLIE- 222

  Fly   722 VTALAKESEMDFDDFLNDLPPGYLENRDKLMKEEQSSAIKTETPDDSDDSEFEAKEASDDDENTI 786
             ||..|    .|.:.||            .::|.|.....|:.         ..::.:|..:...
plant   223 -TAKRK----FFAEVLN------------AVREFQLQIQATQK---------RRRQRNDGVQAWH 261

  Fly   787 SKQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQPPS---PKRRKLAPRDPELDSDDDSTA 848
            .:|.:.....: |..:..|::|:..:..:|:.:.|:|:..:   ...:.||.....:....|:  
plant   262 GRQRQRATRAE-KLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLGAAVQRQKDA-- 323

  Fly   849 VDSTEESEDAATEDEEDLSTVKTDTDMEEQDEQEDGLKSLMADADATSGAAGSGSTAGASGNKDD 913
              ...|..|...:.|.|||.:........||...|      .|.|.|.           |.|.||
plant   324 --KLPEGIDLLKDSESDLSELDAPRSEPLQDLLPD------QDIDITE-----------SDNNDD 369

  Fly   914 MLNDAAALAESLQPKGNTLSS-TNVVTPVPFLLK-HSLREYQHIGLDWLVTMNERKLNGILADEM 976
            . ||   |.|..:...:.:.| ...||..|.||: ..||.||..||.|:|::....|||||||||
plant   370 S-ND---LLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEM 430

  Fly   977 GLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKRV 1041
            |||||||||:|:|:|...||..||:|||.|.:|:.||..||..|.|......|.|..:|||..|.
plant   431 GLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIRE 495

  Fly  1042 GWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQ-LLLNFSTERRLLLT 1105
            .......|:|.||.|.|:::|:...::.:|.|:|:||...:||.:|...: ||..:..:||||||
plant   496 KIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLT 560

  Fly  1106 GTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNE----TLITRLHKVIRP 1166
            |||:||.|.|||||::||:|::|:|.:.|:|||:.|...  .||:...:    .:|.|||.||||
plant   561 GTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFAD--RGNVSLTDEEELLIIHRLHHVIRP 623

  Fly  1167 FLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGN--LLSVINVLMQLR 1229
            |:|||.|.||||.:|.|.:.::.|.:|..|:..|:......  |..||||:  ..|:.|:.||||
plant   624 FILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMG--RVGLQTGSGKSKSLQNLTMQLR 686

  Fly  1230 KVCNHPNMFEARPTISPFQMDGITFHTPRLVCDIMEYDPFTQINLETLNLLLLHLEQTMTAYVSH 1294
            |.||||.:|                                                        
plant   687 KCCNHPYLF-------------------------------------------------------- 695

  Fly  1295 KSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRFHIRVRSAELAQRIKLNAVKVGASPAMRLEGSKI 1359
                                     ..|.|                                   
plant   696 -------------------------VGGDY----------------------------------- 700

  Fly  1360 MPMRNLLPSGRVLKRVSASINPVNMALKPVVINSVVTTTSSSTTASSPTGALSVLSNSKLLGARS 1424
                                   ||..||.::.:                               
plant   701 -----------------------NMWKKPEIVRA------------------------------- 711

  Fly  1425 QINAPTPAKVAKTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTASTTSGQQL 1489
                                                                             
plant   712 ----------------------------------------------------------------- 711

  Fly  1490 IRDPIVKDLATHVKSTVQKQSIANGKTEPEEETEAEDPYKVQELIQMRKEQRLAALKRMAMINRR 1554
                                                                             
plant   712 ----------------------------------------------------------------- 711

  Fly  1555 RTDATPIYGEDCREAIQRCMQATRSLKRSTWQTRGYANCCTAMAHRNGWSLNHLLKSFEERCADL 1619
                                                                             
plant   712 ----------------------------------------------------------------- 711

  Fly  1620 KPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENIVDQALRPKLALLHPIISEMTTKFPD 1684
                                                                             
plant   712 ----------------------------------------------------------------- 711

  Fly  1685 PRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQ 1749
                   .||.:.:||||.:|:..|||:|:|:|||:::||||.:|..:.:.||||||:|:.:||.
plant   712 -------SGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRG 769

  Fly  1750 ILMERFN-GDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHI 1813
            :|:::|| .|...|.|:||||:||:|:||..|||||.:||||||.||.||:||.|||||.::|.:
plant   770 LLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRV 834

  Fly  1814 YRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESSQEKSENK 1878
            :.|||..::|..||::|.||..:....|:.|.|.||                   .::|::.|..
plant   835 FVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTT-------------------STAQDRREML 880

  Fly  1879 DRIVATTTLSDTPSTVVETEKQSLRAFEHALAAAEDE----QDVQATKTAKAEVAADLAEFDENI 1939
            :.|:...|.|      :.|:..|.|......|.:|||    :.:...:..|....|.|.: ::.:
plant   881 EEIMRKGTSS------LGTDVPSEREINRLAARSEDEFWMFERMDEERRRKENYRARLMQ-EQEV 938

  Fly  1940 P-----IATEDPNAEGG-----------PQVELSKAD----LEMQNLVKQLSPIERYAMRFVEET 1984
            |     ..|::.....|           .:.|:..:|    |:....|:....:.:.:||:    
plant   939 PEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQWLKAVESGEDLSKLSMRY---- 999

  Fly  1985 GAAWTAEQLRAAEAELEAQKREWEANRLAA--MHKEEELLKQETEAEEMLTYSRKDSSNQVWISR 2047
                ...:..|:..:....|:..|:.:..:  ..:|:|..::|..|:||....|.|.|.:     
plant  1000 ----NRREENASNTKTSTSKKVIESIQTVSDGTSEEDEEEQEEERAKEMSGKQRVDKSEE----- 1055

  Fly  2048 NTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLPPVYVRKEHKRSRTDAGY----- 2107
                                           .|.|...|.|...::....||:.|:...:     
plant  1056 -------------------------------EEEEGEEENDGKAIFKWNTHKKKRSRYSFTCSSS 1089

  Fly  2108 -------DGSRR 2112
                   :||||
plant  1090 DSRAQSSNGSRR 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
domNP_001286676.1 HSA 543..614 CDD:214727 16/70 (23%)
HepA 692..>1235 CDD:440319 188/554 (34%)
DEXQc_SRCAP 949..1171 CDD:350761 106/226 (47%)
SF2_C_SNF 1685..1817 CDD:350180 67/132 (51%)
DISARM_DrmD_b <1702..>1936 CDD:468472 91/238 (38%)
HEC1 <1858..>2031 CDD:444066 31/198 (16%)
SP1-4_N 2486..>2819 CDD:425404
ATCHR12NP_187252.2 PLN03142 390..>911 CDD:215601 238/986 (24%)
SnAC 916..983 CDD:464219 9/67 (13%)
Blue background indicates that the domain is not in the aligned region.

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